Updating Pangolin

For Major Releases:

Navigate to your local pangolin repository on the command line.

  1. conda activate pangolin
  2. git pull pulls the latest changes from github
  3. conda env update -f environment.yml updates the conda environment
  4. pip install . re-installs pangolin.

For Minor Releases:

pangolin --update

Note: This flag will update versions of pangolin and pangoLEARN to the latest tagged releases. Major releases that involve any changes to dependencies (like v2.3) will need to also update the pangolin environment using the instructions below.

Update flag thanks to Finlay Maguire!

Troubleshooting Update