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Table 1 | Summary of clusters


Lineage Most common countries Earliest date Count Travel History Description Recall rate
A United_Arab_Emirates 16.0%, Germany 11.0%, China 11.0%, USA 9.0%, UK 8.0% 2019-12-30 1586 Root of the pandemic lies within lineage A. Many sequences originating from China and many global exports; including to South East Asia Japan South Korea Australia the USA and Europe represented in this lineage
A.1 USA 84.0%, Australia 8.0%, Canada 4.0%, UK 1.0%, New_Zealand 1.0% 2020-02-16 2694 A North American lineage
A.2 Spain 76.0%, UK 6.0%, Panama 4.0%, USA 2.0%, Portugal 2.0% 2020-02-17 1350 Mostly Spanish lineage now includes South and Central American sequences, other European countries and Kazakhstan.
A.2.1 Panama 100.0% 2020-02-20 22 Lineage with sequences predominantly from Panama
A.2.2 Australia 92.0%, New_Zealand 3.0%, USA 2.0%, Canada 2.0%, UK 1.0% 2020-03-17 509 Australian lineage nested within the diversity of A.2
A.2.3 UK 100.0% 2020-03-12 201 Scottish lineage nested within the diversity of A.2
A.2.4 Panama 100.0% 2020-03-06 125 Panama lineage
A.3 USA 85.0%, Australia 7.0%, UK 2.0%, Panama 2.0%, Canada 1.0% 2020-01-28 894 USA lineage
A.4 USA 98.0%, Canada 2.0% 2020-03-11 61 USA lineage nested in A diversity
A.5 Spain 64.0%, UK 15.0%, Uruguay 5.0%, USA 2.0%, Portugal 2.0% 2020-03-01 467 A lineage with a lot of representation from Spanish-speaking countries. A Spanish/ South-American lineage, but now with sequences from an outbreak in Scotland
A.6 Thailand 93.0%, Singapore 2.0%, Japan 1.0%, Greece 1.0%, Cambodia 1.0% 2020-01-23 162 Lineage from an introduction event into Thailand
A.7 India 100.0% 2020-05-06 17 Indian lineage
A.8 0 Lineage reassigned. Indian lineage merged with A.9
A.9 India 100.0% 2020-04-03 14 Indian lineage
A.10 Spain 100.0% 2020-03-03 14 Spanish lineage
A.11 Ghana 75.0%, Senegal 17.0%, UK 8.0% 2020-03-20 12 Ghana/ Senegal lineage
A.12 Sierra_Leone 83.0%, UK 17.0% 2020-04-10 6 Sierra Leone lineage
A.13 Burkina_Faso 51.0%, Côte_d'Ivoire 49.0% 2020-06-04 59 Cote d'Ivoire lineage
A.14 Côte_d'Ivoire 78.0%, France 11.0%, Burkina_Faso 11.0% 2020-06-21 9 Cote d'Ivoire lineage
A.15 Denmark 92.0%, Sweden 5.0%, United_Arab_Emirates 3.0% 2020-04-20 64 Sweden/ Denmark lineage
A.16 Japan 96.0%, Oman 2.0%, Canada 2.0% 2020-02-15 50 Japanese lineage
B UK 38.0%, USA 16.0%, China 12.0%, Spain 3.0%, Singapore 3.0% 2019-12-24 4988 Base of this lineage also lies in China, with many global exports, two distinct SNPs `8782TC` and `28144CT` define this lineage
B.1 USA 52.0%, UK 18.0%, Denmark 3.0%, France 2.0%, Australia 2.0% 2020-01-24 33969 A large European lineage that corresponds to the Italian outbreak.
B.1.1 UK 46.0%, USA 13.0%, Denmark 4.0%, Russia 3.0%, Portugal 3.0% 2020-02-16 26026 European lineage with 3 clear SNPs `28881GA`,`28882GA`,`28883GC`
B.1.1.1 UK 81.0%, Denmark 2.0%, Belgium 2.0%, Peru 2.0%, Italy 2.0% 2020-03-02 7076 UK/ Europe lineage
B.1.1.2 UK 95.0%, Switzerland 2.0%, Australia 2.0% 2020-03-25 41 UK and Australia
B.1.1.3 UK 100.0% 2020-03-18 109 English lineage
B.1.1.4 UK 60.0%, USA 11.0%, Switzerland 5.0%, Turkey 4.0%, Russia 4.0% 2020-02-26 1045 UK lineage
B.1.1.5 Belgium 39.0%, UK 35.0%, Iceland 7.0%, Germany 7.0%, Austria 3.0% 2020-03-16 69
B.1.1.6 0
B.1.1.7 UK 94.0%, Denmark 1.0%, Netherlands 1.0%, Israel 0.0%, USA 0.0% 2020-01-08 18070
B.1.1.8 India 60.0%, UK 36.0%, Australia 1.0%, USA 1.0%, Germany 1.0% 2020-03-17 467
B.1.1.10 UK 63.0%, USA 7.0%, Canada 3.0%, Switzerland 3.0%, Russia 2.0% 2020-03-01 776 European lineage
B.1.1.12 UK 99.0%, Czech_Republic 1.0% 2020-06-10 77 UK lineage
B.1.1.13 UK 100.0% 2020-03-28 16 English lineage
B.1.1.14 UK 100.0% 2020-04-16 58 Scottish lineage
B.1.1.15 UK 72.0%, Luxembourg 20.0%, Australia 4.0%, Indonesia 1.0%, USA 1.0% 2020-03-19 74 UK/ Luxembourg lineage
B.1.1.16 UK 90.0%, USA 8.0%, Luxembourg 2.0% 2020-04-03 52 Wales lineage
B.1.1.17 Iceland 91.0%, USA 9.0% 2020-03-06 32 Icelandic lineage
B.1.1.20 UK 47.0%, Portugal 16.0%, USA 16.0%, Spain 12.0%, Kenya 6.0% 2020-03-21 32 UK lineage
B.1.1.25 Bangladesh 88.0%, UK 7.0%, Australia 3.0%, South_Korea 1.0%, Italy 1.0% 2020-04-07 237 Bangladesh lineage
B.1.1.26 USA 57.0%, UK 19.0%, Denmark 6.0%, Russia 6.0%, Iceland 2.0% 2020-03-17 255 USA (WA) lineage. Contains some of B.1.1.65
B.1.1.27 Oman 95.0%, United_Arab_Emirates 3.0%, UK 1.0%, Bahrain 1.0% 2020-03-21 116 Oman lineage
B.1.1.28 Brazil 89.0%, UK 3.0%, Australia 1.0%, USA 1.0%, Portugal 1.0% 2020-03-05 785 Brazilian lineage
B.1.1.29 UK 84.0%, Ireland 8.0%, Denmark 4.0%, Germany 1.0%, United_Arab_Emirates 1.0% 2020-03-22 140 (expanded a bit) UK and Ireland
B.1.1.30 Lithuania 100.0% 2020-05-18 12 Lithuanian lineage
B.1.1.31 Russia 79.0%, Thailand 11.0%, UK 8.0%, New_Zealand 2.0% 2020-05-14 63 Russian (a bit upstream)
B.1.1.32 India 90.0%, UK 8.0%, Bahrain 2.0% 2020-04-13 40 Indian lineage
B.1.1.33 Brazil 75.0%, Uruguay 5.0%, Chile 5.0%, USA 4.0%, Kenya 3.0% 2020-03-07 994 Brazilian lineage
B.1.1.34 South_Africa 86.0%, Portugal 6.0%, USA 3.0%, Zimbabwe 2.0%, Mozambique 2.0% 2020-03-18 66 South African lineage
B.1.1.35 UK 100.0% 2020-04-04 16 UK lineage
B.1.1.36 0 USA
B.1.1.37 UK 98.0%, Iceland 1.0%, Netherlands 0.0%, Latvia 0.0%, Switzerland 0.0% 2020-03-23 4606 UK lineage
B.1.1.38 UK 94.0%, USA 3.0%, Russia 1.0%, Ireland 0.0%, Spain 0.0% 2020-03-18 230 UK lineage
B.1.1.39 Switzerland 63.0%, UK 14.0%, Denmark 7.0%, Norway 3.0%, Germany 2.0% 2020-03-12 532 Swiss lineage
B.1.1.40 South_Africa 88.0%, Russia 9.0%, Indonesia 3.0% 2020-04-20 33 South African lineage
B.1.1.41 UK 99.0%, Costa_Rica 1.0% 2020-03-21 154 UK
B.1.1.43 UK 69.0%, Denmark 11.0%, USA 4.0%, Chile 4.0%, Brazil 2.0% 2020-03-25 83 Scottish lineage
B.1.1.44 UK 78.0%, USA 5.0%, Denmark 3.0%, Spain 2.0%, Switzerland 2.0% 2020-02-28 445 UK/ Spain lineage
B.1.1.45 UK 100.0% 2020-05-22 54 UK lineage
B.1.1.46 India 70.0%, UK 18.0%, Singapore 6.0%, USA 2.0%, Australia 2.0% 2020-04-20 93 India
B.1.1.47 Switzerland 37.0%, USA 14.0%, Denmark 12.0%, UK 11.0%, Germany 9.0% 2020-03-20 81 Swiss lineage
B.1.1.48 Japan 100.0% 2020-03-29 13 Japanese lineage
B.1.1.49 UK 100.0% 2020-03-23 56 Wales lineage
B.1.1.50 Israel 65.0%, UK 14.0%, Palestine 14.0%, Denmark 2.0%, Iceland 1.0% 2020-03-29 366 UK/ Israel/ Palestine lineage
B.1.1.51 UK 93.0%, USA 3.0%, Russia 3.0%, United_Arab_Emirates 0.0%, Netherlands 0.0% 2020-03-30 613 UK lineage
B.1.1.52 South_Africa 97.0%, USA 2.0%, Italy 1.0% 2020-03-12 89 South African
B.1.1.53 South_Africa 93.0%, Zimbabwe 5.0%, UK 2.0% 2020-04-02 44 South African lineage
B.1.1.54 UK 41.0%, Germany 13.0%, Switzerland 13.0%, Netherlands 9.0%, Turkey 7.0% 2020-04-16 70 South African lineage
B.1.1.55 UK 100.0% 2020-04-12 74 UK lineage
B.1.1.56 South_Africa 100.0% 2020-05-21 26 South African lineage
B.1.1.57 South_Africa 91.0%, Zimbabwe 7.0%, USA 2.0% 2020-03-31 58 South African lineage, a few English sequences, one Zimbabwe
B.1.1.58 Switzerland 42.0%, Denmark 21.0%, Germany 17.0%, UK 8.0%, Sweden 8.0% 2020-07-20 24 Denmark/ Switzerland lineage
B.1.1.59 UK 98.0%, USA 1.0%, Costa_Rica 1.0%, Bangladesh 1.0% 2020-04-16 162 UK lineage
B.1.1.60 0 Northern Ireland lineage
B.1.1.61 USA 81.0%, UK 12.0%, Denmark 4.0%, Russia 1.0%, South_Africa 1.0% 2020-03-13 91 USA lineage
B.1.1.62 South_Africa 94.0%, Zimbabwe 3.0%, Australia 3.0% 2020-05-06 35 South African lineage
B.1.1.63 Hong_Kong 66.0%, Australia 15.0%, Singapore 4.0%, South_Korea 3.0%, UK 2.0% 2020-06-24 109 Hong Kong lineage
B.1.1.64 UK 48.0%, Portugal 30.0%, USA 5.0%, South_Africa 2.0%, Sweden 1.0% 2020-03-18 134 UK lineage
B.1.1.65 USA 100.0% 2020-04-13 19 USA lineage
B.1.1.66 0 South African lineage
B.1.1.67 UK 96.0%, South_Africa 4.0% 2020-06-07 191 England and South Africa
B.1.1.70 UK 48.0%, Denmark 22.0%, Switzerland 10.0%, Serbia 5.0%, Germany 3.0% 2020-03-10 1464 European lineage
B.1.1.71 UK 19.0%, USA 17.0%, Netherlands 15.0%, Denmark 10.0%, Russia 9.0% 2020-03-06 131 Netherlands lineage
B.1.1.72 USA 95.0%, Switzerland 5.0% 2020-07-25 21 USA lineage
B.1.1.73 USA 94.0%, Denmark 4.0%, Netherlands 1.0%, Kenya 0.0%, Australia 0.0% 2020-04-13 390 Lineage reassigned. Reassigned lineage
B.1.1.74 UK 97.0%, Ireland 2.0%, Switzerland 0.0%, Belgium 0.0% 2020-03-29 225 Northern Irish
B.1.1.75 Belgium 48.0%, South_Africa 28.0%, Sweden 8.0%, Zimbabwe 5.0%, New_Zealand 4.0% 2020-03-17 79 Belgian lineage
B.1.1.76 USA 100.0% 2020-05-09 19 USA lineage
B.1.1.77 USA 96.0%, Australia 4.0% 2020-05-28 24 USA lineage
B.1.1.78 0 Russian lineage
B.1.1.79 0 Russian lineage
B.1.1.80 Bangladesh 72.0%, Australia 15.0%, UK 9.0%, Sweden 2.0%, Singapore 1.0% 2020-04-09 109 Bangladesh lineage
B.1.1.81 UK 100.0% 2020-04-12 5 Northern Ireland lineage
B.1.1.82 UK 42.0%, USA 38.0%, Australia 4.0%, Sweden 4.0%, Nigeria 4.0% 2020-03-19 26 Wales lineage
B.1.1.83 UK 95.0%, Hong_Kong 5.0% 2020-04-15 19 Northern Ireland lineage
B.1.1.84 South_Africa 81.0%, USA 12.0%, UK 6.0% 2020-04-13 16 South African lineage
B.1.1.85 USA 100.0% 2020-09-17 15 USA lineage
B.1.1.86 UK 100.0% 2020-05-19 27 English lineage
B.1.1.87 Hungary 88.0%, UK 12.0% 2020-04-07 17 Hungary lineage
B.1.1.88 Portugal 84.0%, UK 11.0%, USA 5.0% 2020-03-20 19 Portugal lineage
B.1.1.89 UK 95.0%, Australia 3.0%, Peru 1.0%, USA 1.0%, Russia 1.0% 2020-03-12 177 UK lineage
B.1.1.90 Sweden 55.0%, Australia 18.0%, Denmark 18.0%, Nigeria 9.0% 2020-05-15 11 Swedish lineage
B.1.1.91 Sweden 100.0% 2020-04-28 5 Swedish lineage
B.1.1.92 UK 100.0% 2020-06-07 30 English lineage
B.1.1.93 USA 92.0%, Chile 4.0%, Mexico 4.0% 2020-05-26 26 USA lineage
B.1.1.94 Brazil 86.0%, Sweden 5.0%, UK 5.0%, Argentina 5.0% 2020-03-24 22 Brazil lineage
B.1.1.95 UK 89.0%, New_Zealand 9.0%, USA 3.0% 2020-03-12 35 English lineage
B.1.1.96 Saudi_Arabia 58.0%, Russia 33.0%, USA 8.0% 2020-03-25 12 Saudi Arabia/ Russia lineage
B.1.1.97 UK 100.0% 2020-05-06 34 UK lineage
B.1.1.98 USA 100.0% 2020-06-09 4 USA lineage
B.1.1.99 South_Africa 84.0%, Chile 11.0%, UK 5.0% 2020-04-13 19 South African lineage
B.1.1.100 Denmark 100.0% 2020-09-21 25 Denmark lineage
B.1.1.101 India 65.0%, UK 22.0%, USA 6.0%, Russia 4.0%, Denmark 2.0% 2020-03-28 54 Indian lineage
B.1.1.102 UK 46.0%, USA 28.0%, Latvia 15.0%, Nigeria 8.0%, Russia 3.0% 2020-03-26 39 Latvian lineage
B.1.1.103 Bangladesh 54.0%, UK 16.0%, USA 13.0%, Singapore 7.0%, New_Zealand 3.0% 2020-06-03 70 Bangladesh lineage
B.1.1.104 UK 50.0%, Netherlands 19.0%, USA 8.0%, Switzerland 6.0%, Sweden 4.0% 2020-03-03 52 Netherlands/ Europe lineage
B.1.1.105 Turkey 52.0%, UK 22.0%, Germany 12.0%, Denmark 5.0%, Netherlands 2.0% 2020-03-23 86 Turkish lineage
B.1.1.106 UK 62.0%, Spain 31.0%, Germany 4.0%, Lebanon 4.0% 2020-03-18 26 UK lineage
B.1.1.107 USA 45.0%, UK 43.0%, New_Zealand 2.0%, Bangladesh 2.0%, United_Arab_Emirates 2.0% 2020-03-25 183 UK lineage
B.1.1.108 0 UK lineage
B.1.1.109 UK 53.0%, South_Africa 20.0%, USA 9.0%, Ireland 4.0%, Brazil 4.0% 2020-03-22 45 UK lineage
B.1.1.110 Peru 100.0% 2020-05-05 5 Peru lineage
B.1.1.111 Zimbabwe 90.0%, UK 6.0%, USA 3.0% 2020-03-16 31 Zimbabwe lineage
B.1.1.112 Netherlands 100.0% 2020-05-08 16 Netherlands lineage
B.1.1.113 USA 88.0%, Costa_Rica 3.0%, Denmark 3.0%, UK 3.0%, Sweden 3.0% 2020-03-17 33 USA lineage
B.1.1.114 UK 100.0% 2020-04-05 5 Wales lineage
B.1.1.115 UK 96.0%, Italy 1.0%, USA 1.0%, Iceland 1.0% 2020-05-01 73 UK lineage
B.1.1.116 USA 88.0%, Singapore 6.0%, Denmark 6.0% 2020-03-20 17 USA lineage
B.1.1.117 South_Africa 95.0%, Russia 5.0% 2020-06-17 21 South African lineage, previously B.1.1.66
B.1.1.118 USA 99.0%, Russia 1.0% 2020-05-11 68 USA lineage (TX)
B.1.1.119 UK 36.0%, USA 18.0%, United_Arab_Emirates 18.0%, Egypt 9.0%, Germany 9.0% 2020-04-18 11 Northern Ireland lineage
B.1.1.120 UK 100.0% 2020-06-01 37 UK lineage
B.1.1.121 Canada 97.0%, United_Arab_Emirates 3.0% 2020-05-17 38 Canadian lineage
B.1.1.122 Netherlands 91.0%, Belgium 9.0% 2020-06-03 11 Netherlands/ Belgium lineage
B.1.1.123 UK 83.0%, USA 4.0%, Russia 4.0%, Egypt 2.0%, Australia 1.0% 2020-03-14 82 UK lineage
B.1.1.124 0 UK/ Switzerland lineage
B.1.1.125 UK 100.0% 2020-05-21 99 UK lineage
B.1.1.126 USA 100.0% 2020-09-04 10 USA lineage
B.1.1.127 UK 35.0%, Switzerland 24.0%, Russia 16.0%, USA 10.0%, Germany 10.0% 2020-03-31 89 Russian lineage
B.1.1.128 USA 96.0%, UK 1.0%, Mexico 1.0%, Argentina 1.0% 2020-05-19 69 USA lineage
B.1.1.129 Russia 76.0%, Sweden 10.0%, UK 5.0%, United_Arab_Emirates 5.0%, Bolivia 5.0% 2020-05-15 21 Russian lineage
B.1.1.130 UK 56.0%, USA 13.0%, Sweden 7.0%, Switzerland 5.0%, Netherlands 3.0% 2020-03-16 183 UK/ Swedish lineage
B.1.1.131 UK 95.0%, USA 5.0% 2020-03-31 20 UK lineage
B.1.1.132 USA 100.0% 2020-04-11 54 Gambian lineage
B.1.1.133 United_Arab_Emirates 53.0%, UK 28.0%, Australia 15.0%, South_Korea 1.0%, Ireland 1.0% 2020-03-30 68 UAE lineage
B.1.1.134 UK 65.0%, USA 33.0%, Denmark 1.0%, Russia 1.0% 2020-03-28 102 USA/UK lineage
B.1.1.135 USA 98.0%, Sweden 1.0%, Israel 1.0%, Russia 1.0% 2020-03-12 146 USA lineage
B.1.1.136 Australia 97.0%, UK 3.0% 2020-06-03 37 Australian lineage
B.1.1.137 UK 100.0% 2020-03-19 72 UK lineage
B.1.1.138 UK 99.0%, Singapore 1.0%, Iceland 1.0% 2020-04-04 163 UK lineage
B.1.1.139 USA 100.0% 2020-07-04 23 USA lineage
B.1.1.140 Russia 96.0%, UK 4.0% 2020-04-09 27 Russian lineage
B.1.1.141 UK 81.0%, Russia 11.0%, Netherlands 4.0%, Australia 1.0%, Brazil 1.0% 2020-05-03 142 UK/ Russian lineage
B.1.1.142 Australia 94.0%, Austria 6.0% 2020-03-10 32 Australian lineage
B.1.1.143 Brazil 86.0%, Australia 5.0%, Spain 2.0%, New_Zealand 2.0%, Denmark 2.0% 2020-03-19 43 Brazilian lineage, previously B.1.1.28
B.1.1.144 Switzerland 73.0%, UK 15.0%, South_Korea 4.0%, Germany 4.0%, Denmark 4.0% 2020-04-07 26 Swiss lineage
B.1.1.145 UK 91.0%, Greece 4.0%, United_Arab_Emirates 4.0% 2020-03-26 23 UK lineage
B.1.1.146 0 UK lineage
B.1.1.147 UK 86.0%, Ireland 14.0% 2020-04-24 14 UK lineage
B.1.1.148 USA 90.0%, Canada 5.0%, Germany 2.0%, Mexico 1.0%, Italy 1.0% 2020-05-16 83 USA lineage
B.1.1.149 UK 100.0% 2020-05-01 59 UK lineage
B.1.1.150 0 UK lineage
B.1.1.151 UK 99.0%, USA 1.0%, Russia 0.0% 2020-04-01 239 UK lineage
B.1.1.152 Russia 94.0%, UK 6.0% 2020-07-15 16 Russian lineage
B.1.1.153 Denmark 64.0%, Iceland 13.0%, UK 10.0%, France 4.0%, Norway 3.0% 2020-08-31 294 UK/Denmark lineage
B.1.1.154 UK 93.0%, Lithuania 4.0%, USA 4.0% 2020-03-30 28 UK lineage
B.1.1.155 UK 86.0%, USA 14.0% 2020-04-01 21 UK lineage
B.1.1.156 South_Africa 93.0%, Mozambique 7.0% 2020-07-04 14 South African lineage
B.1.1.157 Canada 99.0%, Colombia 1.0% 2020-06-14 137 Canadian lineage
B.1.1.158 USA 96.0%, Peru 4.0% 2020-06-01 50 USA lineage
B.1.1.159 UK 42.0%, Denmark 34.0%, Luxembourg 6.0%, Australia 3.0%, Ecuador 3.0% 2020-03-23 114 UK/ Denmark lineage
B.1.1.160 UK 100.0% 2020-05-03 10 Northern Ireland lineage
B.1.1.161 Saudi_Arabia 52.0%, UK 12.0%, USA 6.0%, Australia 6.0%, United_Arab_Emirates 5.0% 2020-03-13 86 Saudi Arabian lineage
B.1.1.162 Australia 22.0%, UK 22.0%, Switzerland 19.0%, Latvia 11.0%, Russia 7.0% 2020-03-26 27 Australian/ UK lineage lineage
B.1.1.163 Russia 64.0%, UK 25.0%, Australia 3.0%, Slovakia 2.0%, USA 2.0% 2020-03-21 88 Russian lineage
B.1.1.164 UK 98.0%, Japan 1.0%, Switzerland 1.0%, Australia 1.0%, Netherlands 1.0% 2020-03-16 168 UK lineage
B.1.1.165 UK 100.0% 2020-08-28 63 UK lineage
B.1.1.166 UK 69.0%, Netherlands 31.0% 2020-03-04 29 UK lineage
B.1.1.167 Denmark 56.0%, USA 25.0%, Russia 9.0%, Ukraine 3.0%, Germany 3.0% 2020-06-15 32 Denmark/ E European lineage
B.1.1.168 UK 100.0% 2020-04-18 27 UK lineage
B.1.1.169 USA 83.0%, Chile 11.0%, Russia 6.0% 2020-05-04 18 USA lineage
B.1.1.170 Denmark 45.0%, Iceland 22.0%, UK 22.0%, Norway 4.0%, Germany 3.0% 2020-07-19 305 UK/Denmark
B.1.1.171 UK 96.0%, Russia 1.0%, USA 1.0%, China 0.0%, Denmark 0.0% 2020-03-20 260 UK lineage
B.1.1.172 USA 100.0% 2020-04-06 50 USA (split from B.1.1.36)
B.1.1.173 0 UK lineage
B.1.1.174 USA 89.0%, Uganda 11.0% 2020-03-28 54 USA (CA)
B.1.1.175 Bangladesh 74.0%, Switzerland 11.0%, India 5.0%, UK 5.0%, Brazil 5.0% 2020-04-07 19 Bangladesh lineage
B.1.1.176 Canada 99.0%, Singapore 1.0% 2020-03-12 123 Canada
B.1.1.177 USA 95.0%, Chile 3.0%, France 1.0%, Russia 1.0% 2020-05-12 78 USA (TX)
B.1.1.178 UK 100.0% 2020-04-02 24 UK lineage
B.1.1.179 India 100.0% 2020-06-04 6 Indian (split from B.1.1.32)
B.1.1.180 USA 100.0% 2020-06-08 88 USA lineage
B.1.1.181 Turkey 88.0%, United_Arab_Emirates 12.0% 2020-05-15 26 Turkish
B.1.1.182 UK 56.0%, United_Arab_Emirates 44.0% 2020-09-09 9 UAE (Split from B.1.1.72)
B.1.1.183 South_Korea 86.0%, Turkey 14.0% 2020-05-17 7 South Korea
B.1.1.184 Russia 91.0%, Sweden 7.0%, Norway 2.0% 2020-05-08 45 Russian lineage
B.1.1.185 Netherlands 100.0% 2020-03-31 11 Netherlands lineage
B.1.1.186 USA 96.0%, Russia 3.0%, Netherlands 1.0% 2020-07-24 135 USA
B.1.1.187 UK 95.0%, Finland 2.0%, USA 2.0% 2020-03-29 43 UK lineage
B.1.1.189 UK 45.0%, Denmark 17.0%, Germany 12.0%, Switzerland 9.0%, Turkey 7.0% 2020-05-04 163 European (contains several B.1.1.54)
B.1.1.190 UK 100.0% 2020-03-25 17 WALES lineage
B.1.1.191 Denmark 98.0%, Faroe_Islands 0.0%, Portugal 0.0%, USA 0.0%, Sweden 0.0% 2020-03-20 215 Danish lineage
B.1.1.192 USA 86.0%, UK 4.0%, Russia 3.0%, Ireland 2.0%, Bulgaria 2.0% 2020-03-21 111 USA lineage
B.1.1.193 UK 96.0%, USA 3.0%, Australia 1.0% 2020-03-14 67 UK lineage
B.1.1.194 UK 94.0%, Denmark 1.0%, Portugal 1.0%, Spain 1.0%, USA 1.0% 2020-03-13 99 UK lineage
B.1.1.195 UK 89.0%, Russia 2.0%, Denmark 2.0%, USA 2.0%, Ireland 2.0% 2020-04-10 47 UK lineage
B.1.1.196 UK 98.0%, India 1.0%, USA 1.0% 2020-08-21 167 UK lineage
B.1.1.197 UK 71.0%, Canada 8.0%, Russia 5.0%, Chile 3.0%, Ireland 3.0% 2020-03-30 38 UK lineage
B.1.1.198 UK 74.0%, Luxembourg 10.0%, Portugal 6.0%, Ireland 2.0%, Hungary 2.0% 2020-03-09 512 UK/ Portugal lineage (split from B.1.1.15)
B.1.1.199 UK 98.0%, Denmark 2.0% 2020-03-29 58 UK (split from B.1.1.64)
B.1.1.200 UK 98.0%, Singapore 2.0%, Russia 1.0% 2020-06-04 126 UK lineage
B.1.1.201 India 62.0%, Singapore 23.0%, UK 15.0% 2020-04-29 13 Indian and Singapore (split from B.1.1.72)
B.1.1.202 Italy 92.0%, Portugal 8.0% 2020-05-10 13 Italian lineage
B.1.1.203 UK 77.0%, South_Africa 15.0%, USA 4.0%, Latvia 4.0% 2020-04-28 26 UK lineage
B.1.1.204 UK 77.0%, Norway 9.0%, Germany 3.0%, Belgium 3.0%, Luxembourg 2.0% 2020-06-30 93 England (with one czech sequence - party?)
B.1.1.205 USA 100.0% 2020-05-16 48 USA (CA)
B.1.1.206 South_Africa 99.0%, Georgia 1.0%, UK 0.0%, Mozambique 0.0% 2020-05-14 478 South Africa (mostly from B.1.1.54)
B.1.1.207 USA 100.0% 2020-08-14 78 USA (split from B.1.1.53)
B.1.1.208 UK 68.0%, India 9.0%, Denmark 7.0%, USA 4.0%, Peru 4.0% 2020-03-13 114 Mostly UK, some India, Ireland, Portugal
B.1.1.209 Netherlands 79.0%, UK 21.0% 2020-06-20 38 Netherlands
B.1.1.210 USA 60.0%, UK 19.0%, Sweden 3.0%, Russia 3.0%, Ecuador 2.0% 2020-03-15 89 USA (TX)
B.1.1.211 France 56.0%, Belgium 18.0%, UK 12.0%, Japan 3.0%, USA 3.0% 2020-03-10 34 French, swiss, UK, Belgian
B.1.1.212 India 82.0%, Bahrain 16.0%, UK 1.0%, Thailand 1.0% 2020-04-10 95 Indian (split from B.1.1.32)
B.1.1.213 UK 100.0% 2020-03-30 33 England
B.1.1.214 Japan 81.0%, Australia 12.0%, USA 6.0% 2020-06-29 16 Japan
B.1.1.215 UK 100.0% 2020-03-28 11 England with a spanish base
B.1.1.216 Denmark 53.0%, UK 16.0%, India 13.0%, Burkina_Faso 4.0%, Canada 2.0% 2020-03-27 382 India mostly, England a bit, two long Singapore seqs with long branches
B.1.1.217 UK 96.0%, Turkey 1.0%, Italy 1.0%, United_Arab_Emirates 1.0%, USA 1.0% 2020-04-26 272 England
B.1.1.218 UK 90.0%, Denmark 7.0%, Switzerland 3.0% 2020-07-21 29 UK and Switzerland
B.1.1.219 Denmark 59.0%, Iceland 12.0%, UK 8.0%, Germany 7.0%, Norway 6.0% 2020-08-04 113 Northern Europe (UK, Denmark, Norway, Sweden)
B.1.1.220 UK 80.0%, USA 3.0%, Russia 3.0%, South_Africa 2.0%, Denmark 1.0% 2020-03-22 286 England, one Botswana, one Lithuania (split from B.1.1.44)
B.1.1.221 Belgium 94.0%, Netherlands 3.0%, Switzerland 1.0%, Luxembourg 1.0% 2020-04-07 71 Belgian (split from B.1.1.74)
B.1.1.222 USA 83.0%, Mexico 7.0%, Switzerland 5.0%, Spain 2.0%, UK 2.0% 2020-04-24 88 USA and Mexico
B.1.1.223 0 USA, NZ, England, one Russia
B.1.1.224 Denmark 100.0% 2020-08-24 54 Denmark
B.1.1.225 USA 100.0% 2020-06-16 92 USA, mostly southern (FL and TX)
B.1.1.226 USA 93.0%, Canada 4.0%, Turkey 1.0%, Germany 1.0%, India 1.0% 2020-04-29 102 USA, mostly Texas, A few Canada
B.1.1.227 UK 100.0% 2020-06-13 229 England
B.1.1.228 USA 100.0% 2020-05-13 166 USA (WA)
B.1.1.229 Italy 89.0%, Nigeria 5.0%, Germany 3.0%, Denmark 2.0%, Tunisia 2.0% 2020-04-24 63 Italy and Nigeria
B.1.1.230 USA 100.0% 2020-05-18 64 USA (TX)
B.1.1.231 USA 94.0%, Ecuador 3.0%, Aruba 1.0%, Canada 1.0%, Australia 1.0% 2020-03-13 111 USA
B.1.1.232 Iceland 45.0%, UK 20.0%, Belgium 11.0%, Netherlands 8.0%, Germany 8.0% 2020-03-28 448 Northern Europe (UK, Germany, Denmark, Belgium, NL)
B.1.1.233 USA 100.0% 2020-05-13 28 USA (WA)
B.1.1.234 UK 80.0%, Germany 8.0%, Ireland 8.0%, Iceland 2.0%, France 2.0% 2020-04-05 50 England and Northern Ireland and Ireland
B.1.1.235 UK 100.0% 2020-07-23 55 UK lineage
B.1.1.236 UK 98.0%, Germany 2.0% 2020-09-01 92 UK (split from B.1.1.56)
B.1.1.237 UK 97.0%, USA 2.0%, Lithuania 0.0%, Australia 0.0%, India 0.0% 2020-03-12 357 Welsh lineage, previously B.1.1.30
B.1.1.238 New_Zealand 50.0%, Denmark 36.0%, Iceland 14.0% 2020-10-19 14 UK and New Zealand (split from B.1.1.7)
B.1.1.239 USA 80.0%, UK 10.0%, France 3.0%, Russia 3.0%, Denmark 3.0% 2020-04-21 30 USA (CA)
B.1.1.240 UK 95.0%, Portugal 3.0%, Belgium 2.0%, Germany 1.0% 2020-06-28 194 UK
B.1.1.241 UK 30.0%, Finland 25.0%, France 20.0%, Denmark 7.0%, Belgium 6.0% 2020-07-30 230 France, Germany, Switzerland lineage- previously B.1.1.55
B.1.1.242 Gambia 60.0%, Switzerland 25.0%, Peru 5.0%, UK 5.0%, USA 5.0% 2020-07-06 20 UK, Gambia and Switzerland
B.1.1.243 UK 30.0%, Denmark 25.0%, Norway 14.0%, Ukraine 11.0%, Switzerland 7.0% 2020-03-26 44 UK, Ukraine, Denmark
B.1.1.244 USA 67.0%, UK 8.0%, Denmark 6.0%, Russia 4.0%, Bulgaria 3.0% 2020-03-16 152 USA and Mexico
B.1.1.245 UK 99.0%, Russia 1.0%, Portugal 0.0%, USA 0.0% 2020-03-21 288 Northern Ireland lineage, previously B.1.1.60 (split)
B.1.1.246 Russia 89.0%, USA 11.0% 2020-04-05 9 Russia
B.1.1.247 UK 42.0%, Egypt 12.0%, Canada 12.0%, Switzerland 7.0%, Germany 5.0% 2020-03-15 57 Northern Europe (UK, NL, Switzerland) and Northern Africa (Egypt and Morocco), Gambia (some B.1.1.55)
B.1.1.249 UK 78.0%, Denmark 6.0%, Russia 6.0%, USA 6.0%, Brazil 6.0% 2020-03-26 18 Wales lineage
B.1.1.250 UK 69.0%, USA 8.0%, Bangladesh 6.0%, Spain 4.0%, Denmark 2.0% 2020-03-07 126 UK lineage
B.1.1.251 USA 89.0%, UK 10.0%, Spain 1.0% 2020-04-18 71 UK and US
B.1.1.252 South_Africa 100.0% 2020-08-30 5 South Africa (formerly B.1.1.66)
B.1.1.253 UK 99.0%, France 1.0% 2020-05-09 376 UK lineage
B.1.1.254 South_Africa 66.0%, France 13.0%, UK 11.0%, Costa_Rica 2.0%, Germany 2.0% 2020-03-14 53 South Africa and France
B.1.1.255 UK 100.0% 2020-05-21 301 UK lineage
B.1.1.256 UK 97.0%, USA 3.0% 2020-04-30 77 England
B.1.1.257 UK 71.0%, Netherlands 6.0%, Iceland 6.0%, Germany 3.0%, Denmark 3.0% 2020-02-29 263 European/ UK lineage
B.1.1.258 USA 100.0% 2020-05-26 185 USA (TX)
B.1.1.259 UK 100.0% 2020-04-17 8 UK (split from B.1.1.64)
B.1.1.260 UK 91.0%, Philippines 5.0%, USA 5.0% 2020-03-27 22 UK (split from B.1.1.64)
B.1.1.261 Sweden 39.0%, Denmark 31.0%, UK 10.0%, Faroe_Islands 8.0%, Germany 5.0% 2020-03-11 119 Swedish/ Danish lineage
B.1.1.262 UK 100.0% 2020-04-06 48 UK lineage
B.1.1.263 United_Arab_Emirates 95.0%, UK 2.0%, Hong_Kong 1.0%, Singapore 1.0%, South_Korea 0.0% 2020-04-03 236 UAE lineage
B.1.1.264 UK 99.0%, Gambia 1.0% 2020-03-27 145 Wales lineage, previously part of B.1.1.30
B.1.1.265 USA 100.0% 2020-09-22 11 USA lineage
B.1.1.266 UK 31.0%, Czech_Republic 31.0%, Switzerland 7.0%, Germany 7.0%, Ireland 4.0% 2020-05-23 54 Czech lineage
B.1.1.267 Ireland 98.0%, Turkey 2.0% 2020-03-17 94 Irish lineage
B.1.1.268 USA 100.0% 2020-05-31 37 USA lineage
B.1.1.269 UK 50.0%, Denmark 14.0%, France 8.0%, Spain 8.0%, Belgium 5.0% 2020-05-19 332 Denmark/ UK lineage
B.1.1.270 UK 100.0% 2020-03-21 97 UK lineage
B.1.1.271 Austria 77.0%, Sweden 8.0%, Bangladesh 8.0%, Russia 8.0% 2020-03-31 13 Austrian lineage
B.1.1.272 Denmark 95.0%, UK 5.0% 2020-03-15 183 Denmark lineage
B.1.1.273 South_Africa 83.0%, United_Arab_Emirates 9.0%, Switzerland 4.0%, Russia 1.0%, Denmark 1.0% 2020-03-31 179 South african lineage, previously part of B.1.1.56
B.1.1.274 UK 75.0%, Russia 21.0%, Norway 2.0%, Crimea 1.0%, United_Arab_Emirates 1.0% 2020-04-03 105 UK lineage
B.1.1.275 DRC 70.0%, UK 19.0%, United_Arab_Emirates 7.0%, Germany 4.0% 2020-03-19 27 DRC lineage
B.1.1.276 0 Previously part of B.1.1.55, USA lineage
B.1.1.277 Denmark 52.0%, UK 21.0%, Norway 10.0%, Iceland 3.0%, Germany 3.0% 2020-03-17 1030 Europe/ Denmark lineage
B.1.1.278 0 UK lineage
B.1.1.279 UK 99.0%, Denmark 0.0%, Peru 0.0%, USA 0.0%, Turkey 0.0% 2020-03-21 1103 UK lineage
B.1.1.280 Lithuania 79.0%, UK 10.0%, Norway 8.0%, Denmark 4.0% 2020-07-30 52 Lithuanian lineage
B.1.1.281 India 89.0%, Bahrain 10.0%, UK 1.0%, Singapore 0.0%, Australia 0.0% 2020-03-24 543 Indian lineage, previously part of B.1.1.32
B.1.1.282 Netherlands 36.0%, UK 25.0%, Switzerland 12.0%, Germany 7.0%, Ireland 5.0% 2020-03-10 59 Netherlands, Denmark lineage
B.1.1.283 Japan 83.0%, Turkey 8.0%, USA 8.0% 2020-03-16 12 Japanese lineage
B.1.1.284 Japan 92.0%, Australia 2.0%, South_Korea 2.0%, Thailand 1.0%, Hong_Kong 1.0% 2020-05-30 91 Japanese lineage
B.1.1.285 USA 46.0%, Japan 24.0%, UK 17.0%, Ireland 4.0%, United_Arab_Emirates 4.0% 2020-03-28 54 Japan/ USA lineage
B.1.1.286 UK 99.0%, Netherlands 0.0%, Colombia 0.0%, Italy 0.0% 2020-05-02 332 UK lineage
B.1.1.287 USA 97.0%, Mexico 3.0% 2020-06-03 29 USA lineage
B.1.1.288 Denmark 84.0%, UK 6.0%, Germany 3.0%, Switzerland 2.0%, Ireland 1.0% 2020-03-20 607 Danish lineage
B.1.1.289 UK 100.0% 2020-03-20 446 Wales lineage
B.1.1.290 USA 99.0%, Switzerland 1.0% 2020-04-27 99 USA lineage, previously part of B.1.1.76
B.1.1.291 USA 100.0%, Colombia 0.0%, Russia 0.0%, UK 0.0% 2020-04-06 1027 USA lineage (WA), previously part of B.1.1.77
B.1.1.292 UK 94.0%, Switzerland 4.0%, Singapore 2.0% 2020-03-23 52 UK lineage
B.1.1.293 Gambia 85.0%, France 8.0%, UK 6.0%, Italy 2.0% 2020-04-29 66 Gambian lineage
B.1.1.294 UK 43.0%, Russia 19.0%, Denmark 15.0%, Israel 10.0%, South_Korea 2.0% 2020-03-31 249 Russain/ UK lineage
B.1.1.295 0 UK/Australia lineage
B.1.1.296 UK 76.0%, United_Arab_Emirates 15.0%, Japan 2.0%, France 2.0%, Australia 1.0% 2020-03-07 303 UK lineage
B.1.1.297 Belgium 49.0%, Luxembourg 25.0%, Netherlands 12.0%, Germany 9.0%, UK 1.0% 2020-07-16 163 Belgium lineage
B.1.1.298 Denmark 100.0%, Faroe_Islands 0.0%, Iceland 0.0% 2020-04-20 885 Danish lineage, contains the origin of the Y453F mutation associated with mink
B.1.1.299 UK 100.0% 2020-05-22 79 UK lineage
B.1.1.300 UK 100.0% 2020-06-11 90 UK lineage
B.1.1.301 UK 99.0%, Germany 1.0%, South_Korea 0.0%, Denmark 0.0%, Romania 0.0% 2020-05-22 800 UK lineage, some previously part of B.1.1.55
B.1.1.302 Sweden 41.0%, Denmark 40.0%, UK 9.0%, Norway 7.0%, Latvia 3.0% 2020-07-06 198 Swedish lineage
B.1.1.303 UK 99.0%, Switzerland 0.0%, Germany 0.0% 2020-06-09 343 UK lineage
B.1.1.304 USA 83.0%, UK 16.0%, Israel 1.0%, Canada 1.0%, Norway 0.0% 2020-05-29 790 UK/USA lineage
B.1.1.305 UK 68.0%, Germany 8.0%, Italy 8.0%, Denmark 4.0%, North_Macedonia 4.0% 2020-07-18 75 UK lineage
B.1.1.306 India 87.0%, Canada 8.0%, UK 3.0%, USA 1.0%, Denmark 1.0% 2020-04-06 573 Indian lineage
B.1.1.307 UK 98.0%, Gibraltar 1.0%, Ghana 0.0%, New_Zealand 0.0%, Russia 0.0% 2020-05-03 2047 UK lineage
B.1.1.308 UK 99.0%, Denmark 1.0% 2020-08-31 81 UK lineage
B.1.1.309 UK 100.0% 2020-08-11 153 UK lineage
B.1.1.310 UK 100.0% 2020-08-24 35 Northern Ireland lineage
B.1.1.311 UK 99.0%, Denmark 0.0%, Ireland 0.0%, Norway 0.0% 2020-06-06 2474 UK lineage
B.1.1.312 Jordan 98.0%, Israel 1.0%, USA 0.0%, New_Zealand 0.0%, Malaysia 0.0% 2020-08-13 442 Jordan lineage
B.1.1.313 UK 96.0%, Russia 3.0%, North_Macedonia 1.0% 2020-03-13 69 English lineage
B.1.1.314 Chile 86.0%, Brazil 13.0%, Kenya 1.0% 2020-03-31 108 Brazilian lineage, previously part of B.1.1.33
B.1.1.315 UK 96.0%, Denmark 3.0%, United_Arab_Emirates 0.0%, Portugal 0.0%, Germany 0.0% 2020-04-25 4220 Previously D.1, UK/ UAE lineage
B.1.2 USA 98.0%, Denmark 0.0%, Australia 0.0%, UK 0.0%, Romania 0.0% 2020-03-12 12585 USA lineage
B.1.3 USA 90.0%, Canada 4.0%, Israel 2.0%, UK 2.0%, Argentina 1.0% 2020-03-05 2178 USA lineage (Defined twice, need to check)
B.1.3.1 South_Korea 85.0%, USA 11.0%, UK 2.0%, Canada 1.0%, Australia 0.0% 2020-03-12 996 South Korean lineage
B.1.3.2 Argentina 96.0%, USA 2.0%, Hong_Kong 1.0%, Spain 1.0%, Netherlands 1.0% 2020-03-16 193 Argentinian lineage
B.1.3.3 Israel 93.0%, UK 7.0% 2020-04-19 27 Israel lineage
B.1.3.4 UK 62.0%, Israel 24.0%, Canada 15.0% 2020-03-15 55 Israel/ UK lineage
B.1.5 USA 25.0%, UK 22.0%, Spain 12.0%, Switzerland 6.0%, Italy 3.0% 2020-01-24 12804 Spanish base, European lineage/ lots of Spanish sequences towards the basal end of the subtree and exports around the globe.
B.1.5.2 0 Lineage reassigned. Reassigned B.1.190, Netherlands lineage
B.1.5.5 0 Lineage reassigned. Reassigned B.1.225
B.1.5.6 0 Lineage reassigned. UK lineage reassigned B.1.223
B.1.5.11 0 Lineage reassigned. Reassigned B.1.189, USA/ Mexico lineage
B.1.5.12 Gambia 54.0%, Senegal 17.0%, UK 8.0%, Italy 7.0%, Spain 5.0% 2020-03-12 283 Senegal/ Gambia lineage (Has a child lineage B.1.5.12.1-> alias E.1)
B.1.5.13 0 Lineage reassigned. Reassigned B.1.180, Romanian lineage
B.1.5.15 0 Lineage reassigned. Reassigned B.1.185, USA lineage
B.1.5.16 South_Africa 100.0% 2020-05-30 13 South African lineage
B.1.5.17 0 Lineage reassigned. Reassigned B.1.181, USA lineage
B.1.5.18 0 Lineage reassigned. Reassigned B.1.256
B.1.5.19 South_Africa 95.0%, Denmark 3.0%, Zimbabwe 2.0% 2020-04-15 62 South African lineage
B.1.5.21 UK 97.0%, USA 3.0% 2020-04-24 62 Scottish lineage
B.1.5.25 0 Lineage reassigned. Reassigned B.1.229
B.1.5.26 0 Lineage reassigned. Reassigned B.1.232
B.1.5.27 USA 100.0% 2020-04-20 8 USA lineage (CA)
B.1.5.28 0 Lineage reassigned. Reassigned B.1.231
B.1.5.29 USA 92.0%, Romania 4.0%, Germany 4.0% 2020-04-16 25 USA lineage (WI/ IL)
B.1.5.30 UK 98.0%, Denmark 2.0% 2020-03-16 57 UK lineage
B.1.5.31 South_Africa 95.0%, Spain 5.0% 2020-04-02 22 South African lineage
B.1.5.32 Colombia 95.0%, Spain 5.0% 2020-03-11 21 Colombian lineage
B.1.5.33 UK 69.0%, Chile 19.0%, India 6.0%, USA 6.0% 2020-03-16 16 Previously B.1.98, redefined. UK lineage
B.1.5.34 UK 79.0%, USA 16.0%, Spain 5.0% 2020-03-19 19 Previously B.1.141, reassigned Scottish lineage
B.1.5.35 India 100.0% 2020-05-27 9 Indian lineage
B.1.5.36 India 100.0% 2020-03-30 7 Indian lineage
B.1.6 Belgium 68.0%, DRC 11.0%, France 8.0%, UK 4.0%, Austria 2.0% 2020-03-05 53 Lineage reassigned. Reassigned lineage
B.1.8 Netherlands 54.0%, Germany 10.0%, South_Africa 8.0%, Austria 5.0%, Iceland 3.0% 2020-03-04 317 Netherlands/ South African lineage
B.1.8.2 USA 100.0% 2020-04-22 32 USA lineage (CA)
B.1.9 Turkey 22.0%, UK 18.0%, Belgium 16.0%, Netherlands 12.0%, Switzerland 6.0% 2020-03-14 304 Turkish lineage
B.1.11 UK 100.0% 2020-03-29 19 UK lineage
B.1.12 Belgium 39.0%, UK 30.0%, Luxembourg 25.0%, France 4.0%, Switzerland 1.0% 2020-03-04 102 Luxembourg lineage
B.1.13 UK 84.0%, France 3.0%, Australia 3.0%, Canada 3.0%, USA 1.0% 2020-03-09 70 UK lineage
B.1.14 USA 100.0% 2020-03-16 48 Lineage reassigned. Reassigned lineage
B.1.19 USA 74.0%, Spain 8.0%, Luxembourg 8.0%, UK 4.0%, Denmark 2.0% 2020-03-08 50 USA lineage (WI)
B.1.21 USA 99.0%, Denmark 0.0%, UK 0.0%, Iceland 0.0% 2020-03-08 422 Split up Washington (USA)
B.1.22 Netherlands 85.0%, UK 3.0%, Germany 3.0%, Australia 2.0%, Belgium 1.0% 2020-03-05 595 Netherlands lineage
B.1.23 Australia 85.0%, New_Zealand 6.0%, Brazil 2.0%, Oman 2.0%, Russia 2.0% 2020-03-08 102 Australian/ New Zealand lineage
B.1.25 Australia 100.0% 2020-03-22 7 Australian lineage
B.1.26 USA 100.0% 2020-06-14 18 USA/Gambia lineage
B.1.34 0 English lineage
B.1.35 UK 97.0%, USA 1.0%, Norway 1.0%, France 0.0%, Germany 0.0% 2020-03-02 215 UK lineage
B.1.36 UK 39.0%, India 20.0%, Finland 13.0%, Denmark 7.0%, Canada 4.0% 2020-03-15 2005 Global lineage with lots of representation of sequences from India and Saudi Arabia. Sequences also from Europe and UK. Now includes some sequences that previously had been assigned B.1.113.
B.1.36.1 India 34.0%, Hong_Kong 20.0%, Denmark 16.0%, UK 10.0%, Australia 7.0% 2020-03-31 207 Indian lineage
B.1.36.3 Denmark 91.0%, UK 6.0%, New_Zealand 1.0%, Australia 1.0% 2020-05-23 68 Danish lineage
B.1.36.4 Netherlands 85.0%, Belgium 15.0% 2020-08-28 13 Netherlands lineage
B.1.36.5 Saudi_Arabia 89.0%, Australia 3.0%, Bangladesh 3.0%, Netherlands 3.0%, Singapore 3.0% 2020-04-08 36 Saudi Arabia lineage
B.1.36.6 UK 30.0%, Saudi_Arabia 15.0%, Norway 11.0%, Denmark 10.0%, India 5.0% 2020-03-15 296 Norway lineage
B.1.36.7 Oman 100.0% 2020-04-07 10 Oman lineage
B.1.36.8 Canada 100.0% 2020-07-03 53 Canadian lineage
B.1.36.9 UK 96.0%, Denmark 4.0%, Gibraltar 0.0% 2020-09-07 224 UK lineage
B.1.36.10 Jordan 94.0%, UK 3.0%, Australia 2.0%, Finland 2.0% 2020-09-30 65 Jordan lineage
B.1.36.11 Netherlands 100.0% 2020-06-02 11 Netherlands lineage
B.1.36.12 UK 100.0% 2020-06-12 100 UK lineage
B.1.36.13 Norway 53.0%, Ireland 19.0%, Denmark 9.0%, Finland 8.0%, UK 6.0% 2020-03-27 162 Irish lineage
B.1.36.14 Denmark 100.0% 2020-08-10 10 Danish lineage
B.1.36.15 Saudi_Arabia 79.0%, USA 16.0%, India 5.0% 2020-04-18 19 Saudi Arabia lineage
B.1.36.16 Thailand 45.0%, UK 29.0%, Bangladesh 12.0%, Singapore 6.0%, Malaysia 3.0% 2020-05-03 209 Bangladesh/UK lineage
B.1.36.17 UK 95.0%, Canada 4.0%, Denmark 0.0%, Switzerland 0.0%, New_Zealand 0.0% 2020-06-19 1953 UK lineage
B.1.36.17.1 0 Lineage reassigned. Alias F.1 New Zealand lineage
B.1.37 USA 100.0% 2020-03-10 62 USA lineage
B.1.38 USA 100.0% 2020-03-17 31 USA lineage
B.1.39 Denmark 95.0%, UK 2.0%, Singapore 2.0%, New_Zealand 1.0%, Faroe_Islands 1.0% 2020-03-09 240 Danish lineage
B.1.40 UK 71.0%, USA 25.0%, Denmark 3.0% 2020-03-15 63 Scottish lineage
B.1.44 UK 100.0% 2020-03-23 121 Wales lineage
B.1.67 UK 81.0%, Ecuador 19.0% 2020-03-23 26 Wales lineage
B.1.69 UK 92.0%, Italy 8.0% 2020-03-06 25 Scottish lineage
B.1.70 UK 95.0%, USA 5.0% 2020-03-13 41 Scottish lineage
B.1.74 Spain 77.0%, Portugal 9.0%, Canada 3.0%, Chile 2.0%, UK 2.0% 2020-03-01 88 Spanish lineage
B.1.75 UK 88.0%, Morocco 4.0%, USA 2.0%, Luxembourg 2.0%, Iceland 2.0% 2020-03-06 93 English lineage
B.1.76 UK 88.0%, Netherlands 6.0%, Switzerland 3.0%, USA 3.0% 2020-03-18 33 English lineage
B.1.77 UK 100.0% 2020-05-18 23 UK lineage, Some reassigned B.1.5
B.1.78 Netherlands 80.0%, USA 15.0%, UK 3.0%, Malaysia 1.0%, Germany 1.0% 2020-03-12 94 Netherlands lineage
B.1.79 UK 100.0% 2020-04-03 37 UK lineage, some now reassigned to B.1.5
B.1.80 India 88.0%, USA 12.0% 2020-04-12 8 Indian lineage
B.1.81 UK 100.0% 2020-03-18 33 English lineage
B.1.82 UK 96.0%, Belgium 4.0% 2020-03-17 50 UK lineage
B.1.83 Belgium 95.0%, USA 2.0%, France 2.0%, Australia 2.0% 2020-03-23 56 Belgian lineage
B.1.84 DRC 100.0% 2020-04-10 33 DRC lineage
B.1.88 UK 58.0%, Denmark 9.0%, Norway 7.0%, Germany 7.0%, Spain 5.0% 2020-03-11 215 Scottish lineage
B.1.88.1 Denmark 95.0%, UK 3.0%, Germany 1.0% 2020-09-14 153 Danish lineage
B.1.89 UK 88.0%, Canada 8.0%, France 4.0% 2020-03-25 24 UK lineage
B.1.90 UK 100.0% 2020-03-29 36 Scottish lineage
B.1.91 Portugal 67.0%, UK 13.0%, New_Zealand 5.0%, Italy 3.0%, Netherlands 2.0% 2020-02-21 427 Portuguese lineage
B.1.93 UK 92.0%, Switzerland 3.0%, Ireland 2.0%, France 1.0%, USA 0.0% 2020-03-06 1010 UK lineage
B.1.94 Luxembourg 86.0%, Switzerland 5.0%, Belgium 5.0%, Rwanda 5.0% 2020-03-15 22 Luxembourg lineage
B.1.95 India 96.0%, Spain 4.0% 2020-04-05 24 Indian lineage
B.1.96 Netherlands 96.0%, USA 2.0%, Norway 2.0% 2020-03-14 47 Netherlands lineage
B.1.97 UK 100.0% 2020-03-24 40 UK lineage
B.1.98 UK 78.0%, USA 12.0%, Australia 4.0%, Canada 2.0%, Chile 1.0% 2020-02-03 720 Some reassigned to B.1.5.33, UK lineage
B.1.102 Iceland 80.0%, Spain 7.0%, Germany 7.0%, UK 7.0% 2020-03-13 15 Iceland lineage
B.1.103 USA 91.0%, Bolivia 3.0%, Colombia 3.0%, France 3.0% 2020-03-19 34 US lineage (MI)
B.1.104 UK 87.0%, USA 7.0%, Singapore 5.0%, Colombia 1.0% 2020-03-19 139 English lineage
B.1.105 UK 99.0%, Italy 1.0% 2020-03-06 99 UK lineage
B.1.106 South_Africa 59.0%, USA 37.0%, Australia 2.0%, Italy 2.0%, Spain 1.0% 2020-03-28 121 South African lineage, some USA sequences
B.1.107 Denmark 84.0%, UK 16.0% 2020-03-16 77 Danish lineage, with USA and UK sequences
B.1.108 USA 87.0%, UK 10.0%, Australia 2.0%, Belgium 1.0% 2020-03-14 127 USA lineage
B.1.109 Luxembourg 100.0% 2020-04-12 13 Luxembourg lineage
B.1.110 USA 55.0%, Chile 37.0%, Argentina 3.0%, Australia 2.0%, UK 2.0% 2020-03-02 338 Chilean/ US lineage
B.1.111 Colombia 40.0%, Trinidad 16.0%, UK 14.0%, Canada 8.0%, USA 8.0% 2020-03-07 80 South/ Central American lineage
B.1.112 USA 99.0%, UK 1.0% 2020-04-06 186 USA lineage (UT)
B.1.113 India 100.0% 2020-06-08 17 Indian lineage
B.1.114 Canada 93.0%, USA 4.0%, Norway 1.0%, Singapore 1.0% 2020-03-18 71 Canadian lineage
B.1.115 Israel 48.0%, UK 28.0%, USA 25.0% 2020-03-17 40 Israel lineage
B.1.116 USA 100.0% 2020-04-29 84 USA lineage
B.1.117 UK 96.0%, USA 3.0%, Côte_d'Ivoire 1.0% 2020-03-30 79 UK lineage
B.1.118 Denmark 99.0%, USA 1.0% 2020-03-09 112 Denmark lineage
B.1.119 USA 100.0% 2020-03-14 70 US lineage (MI)
B.1.120 UK 100.0% 2020-03-27 130 Wales lineage
B.1.124 USA 100.0% 2020-03-26 120 USA lineage (WA)
B.1.126 Germany 76.0%, Equatorial_Guinea 20.0%, USA 2.0%, Bosnia_and_Herzegovina 1.0%, Denmark 1.0% 2020-03-16 104 German lineage
B.1.127 Denmark 95.0%, Ukraine 4.0%, Iceland 1.0%, UK 0.0%, Czech_Republic 0.0% 2020-05-15 439 Ukraine lineage
B.1.128 Canada 39.0%, DRC 33.0%, Switzerland 24.0%, UK 2.0%, France 2.0% 2020-03-13 119 Swiss/ DRC lineage
B.1.131 Denmark 36.0%, UK 27.0%, Norway 6.0%, Ukraine 6.0%, Lithuania 5.0% 2020-02-23 111 Ukraine/ European lineage
B.1.134 USA 100.0% 2020-04-07 129 USA lineage
B.1.135 Portugal 100.0% 2020-03-18 11 Small Portuguese lineage
B.1.136 India 100.0% 2020-03-27 11 Indian lineage, some reassigned B.1.5.36
B.1.137 USA 97.0%, Belgium 2.0%, UK 1.0% 2020-04-06 161 USA lineage
B.1.138 Australia 100.0% 2020-03-22 7 Small Australian lineage
B.1.139 USA 97.0%, Denmark 2.0%, Switzerland 0.0%, New_Zealand 0.0%, France 0.0% 2020-03-04 1056 USA lineage
B.1.140 South_Africa 96.0%, Hong_Kong 4.0% 2020-03-14 49 South African lineage
B.1.141 UK 88.0%, USA 4.0%, Spain 3.0%, France 2.0%, Canada 1.0% 2020-03-11 98 Scottish lineage, first wave of N439K
B.1.142 UK 100.0%, Sweden 0.0% 2020-03-12 341 Welsh lineage
B.1.143 India 83.0%, USA 13.0%, UK 4.0% 2020-05-02 23 Indian lineage
B.1.144 South_Africa 100.0% 2020-06-11 13 South African lineage
B.1.145 India 100.0% 2020-04-21 13 Indian lineage
B.1.146 UK 79.0%, Switzerland 14.0%, Luxembourg 2.0%, Austria 1.0%, Bahrain 0.0% 2020-05-24 202 Swiss lineage
B.1.147 Canada 69.0%, UK 17.0%, France 6.0%, Belgium 4.0%, Switzerland 2.0% 2020-03-04 519 Canada/ Belgium lineage
B.1.149 DRC 96.0%, UK 4.0% 2020-04-08 23 DRC lineage
B.1.150 UK 100.0% 2020-04-03 36 Lineage reassigned. Reassigned lineage
B.1.151 UK 84.0%, Ireland 7.0%, France 3.0%, USA 2.0%, Canada 1.0% 2020-03-13 89 UK lineage
B.1.152 UK 100.0% 2020-03-29 38 English lineage
B.1.153 UK 56.0%, Kenya 12.0%, USA 9.0%, Australia 5.0%, France 5.0% 2020-03-16 43 English lineage with some Australian, New Zealand and European sequences
B.1.154 USA 98.0%, UK 2.0% 2020-03-30 40 USA lineage
B.1.156 UK 100.0% 2020-03-20 49 Scottish lineage
B.1.157 UK 62.0%, Spain 31.0%, USA 2.0%, Netherlands 1.0%, Australia 1.0% 2020-03-08 188 Spain/ UK lineage
B.1.158 Denmark 56.0%, Finland 44.0% 2020-03-13 9 Finland lineage
B.1.159 France 70.0%, Germany 13.0%, DRC 6.0%, Bangladesh 4.0%, Netherlands 2.0% 2020-03-18 54 French lineage
B.1.160 UK 27.0%, Denmark 19.0%, Switzerland 13.0%, France 10.0%, Luxembourg 10.0% 2020-03-12 7759 Previously part of B.1.36: Turkey, India Saudi Arabia lineage (split in the most recent phylogeny)
B.1.160.1 UK 75.0%, Austria 10.0%, Denmark 5.0%, Finland 3.0%, India 2.0% 2020-03-12 209 European lineage
B.1.160.2 UK 96.0%, Canada 3.0%, USA 1.0% 2020-08-28 138 English lineage
B.1.160.3 Indonesia 57.0%, Singapore 22.0%, UK 5.0%, Malaysia 5.0%, Australia 3.0% 2020-04-09 37 Indonesian lineage
B.1.160.4 UK 97.0%, Denmark 3.0% 2020-07-02 182 English lineage
B.1.160.5 Denmark 99.0%, France 1.0% 2020-09-28 75 Danish lineage
B.1.160.6 Denmark 84.0%, UK 13.0%, Netherlands 1.0%, Norway 1.0%, Sweden 1.0% 2020-08-16 1323 Danish lineage
B.1.160.7 UK 100.0%, Denmark 0.0%, Italy 0.0% 2020-10-03 511 UK lineage
B.1.160.8 Denmark 100.0%, Iceland 0.0% 2020-10-05 344 Danish lineage
B.1.161 USA 100.0% 2020-03-27 47 USA lineage (OR)
B.1.162 USA 99.0%, Serbia 1.0% 2020-03-25 109 USA lineage (WI)
B.1.163 USA 100.0% 2020-03-16 32 USA lineage
B.1.164 Latvia 82.0%, Serbia 10.0%, UK 3.0%, South_Korea 3.0%, Netherlands 3.0% 2020-03-31 39 Latvian lineage
B.1.165 UK 89.0%, USA 5.0%, France 4.0%, Australia 2.0% 2020-03-24 80 UK lineage
B.1.166 USA 100.0% 2020-03-04 104 USA lineage
B.1.167 UK 100.0% 2020-03-27 13 UK lineage
B.1.168 UK 92.0%, USA 8.0% 2020-04-23 40 Scottish lineage
B.1.169 USA 100.0% 2020-03-31 160 USA lineage (WA)
B.1.173 UK 100.0% 2020-05-16 27 Lineage reassigned. Reassigned lineage
B.1.177 UK 79.0%, Denmark 4.0%, Iceland 4.0%, Spain 3.0%, Netherlands 2.0% 2020-03-07 59660 Spain to Europe
B.1.177.1 Denmark 100.0% 2020-08-31 62 Denmark
B.1.177.2 UK 96.0%, Ireland 3.0%, Denmark 0.0% 2020-09-03 203 English lineage
B.1.177.3 UK 98.0%, Iceland 2.0% 2020-08-24 119 Welsh/English lineage
B.1.177.4 UK 99.0%, Denmark 0.0%, Turkey 0.0%, New_Zealand 0.0%, France 0.0% 2020-08-27 3777 UK lineage
B.1.177.5 UK 100.0%, Italy 0.0% 2020-08-29 535 Scottish lineage
B.1.177.6 UK 99.0%, Tunisia 0.0%, Spain 0.0%, Netherlands 0.0%, Italy 0.0% 2020-07-07 719 English lineage
B.1.177.7 UK 96.0%, Denmark 1.0%, Netherlands 1.0%, Italy 0.0%, Iceland 0.0% 2020-08-26 2974 Welsh lineage
B.1.177.8 UK 92.0%, Iceland 4.0%, Italy 2.0%, Denmark 1.0%, Spain 0.0% 2020-08-18 931 Scottish lineage
B.1.177.9 UK 100.0% 2020-09-10 777 UK lineage
B.1.177.10 UK 99.0%, Denmark 0.0%, France 0.0%, New_Zealand 0.0% 2020-09-02 439 English lineage
B.1.177.11 UK 99.0%, South_Korea 0.0%, Denmark 0.0%, Singapore 0.0% 2020-04-04 556 UK lineage
B.1.177.12 Denmark 100.0%, Iceland 0.0%, Israel 0.0%, UK 0.0%, Czech_Republic 0.0% 2020-03-30 2483 Danish lineage
B.1.177.13 UK 100.0% 2020-08-02 107 UK lineage
B.1.177.14 Denmark 64.0%, Norway 12.0%, Tunisia 6.0%, Spain 6.0%, UK 5.0% 2020-07-30 116 Norway/Denmark lineage
B.1.177.15 UK 98.0%, Spain 1.0%, Germany 1.0%, Italy 1.0%, Denmark 0.0% 2020-08-07 1465 Welsh/ English lineage
B.1.177.16 UK 99.0%, Denmark 0.0%, Netherlands 0.0%, Italy 0.0%, Sweden 0.0% 2020-09-10 1086 English lineage
B.1.177.17 UK 99.0%, Germany 1.0% 2020-09-01 938 English lineage
B.1.177.18 UK 97.0%, Ireland 2.0%, Luxembourg 0.0%, Singapore 0.0% 2020-09-14 568 English lineage
B.1.177.19 UK 99.0%, New_Zealand 0.0%, Norway 0.0%, Tunisia 0.0%, India 0.0% 2020-09-03 409 UK lineage
B.1.177.20 UK 99.0%, Germany 1.0%, Ireland 0.0%, New_Zealand 0.0% 2020-03-21 518 UK lineage
B.1.177.21 Denmark 99.0%, Iceland 0.0%, UK 0.0%, Sweden 0.0%, Norway 0.0% 2020-08-24 5146 Danish lineage
B.1.177.22 UK 86.0%, Denmark 9.0%, Spain 2.0%, Iceland 1.0%, Gibraltar 1.0% 2020-08-17 150 UK lineage
B.1.177.23 Switzerland 94.0%, UK 4.0%, South_Korea 1.0%, Canada 1.0%, Spain 1.0% 2020-08-17 153 UK lineage
B.1.177.24 Denmark 90.0%, Luxembourg 6.0%, Spain 3.0%, UK 1.0%, Netherlands 0.0% 2020-08-17 501 Danish lineage
B.1.177.25 Gibraltar 100.0% 2020-10-27 39 Gibraltar lineage
B.1.177.26 UK 100.0% 2020-09-04 139 UK lineage
B.1.177.27 Denmark 100.0% 2020-10-12 101 Danish lineage
B.1.178 Switzerland 25.0%, DRC 17.0%, UK 11.0%, France 10.0%, India 8.0% 2020-03-12 126 France/ Switzerland/ Austria/ DRC lineage
B.1.179 Denmark 96.0%, Italy 1.0%, Australia 1.0%, Switzerland 1.0%, USA 1.0% 2020-03-09 164 Danish lineage
B.1.180 Romania 79.0%, Spain 11.0%, UK 5.0%, Switzerland 5.0% 2020-04-02 19 Romanian lineage (previously B.1.5.13)
B.1.181 USA 100.0% 2020-04-20 46 USA lineage (previously B.1.5.17)
B.1.182 Spain 98.0%, USA 2.0% 2020-03-13 133 Spanish lineage
B.1.183 Canada 63.0%, France 20.0%, USA 7.0%, South_Africa 7.0%, Kenya 3.0% 2020-03-16 30 Canadian lineage
B.1.184 India 67.0%, Saudi_Arabia 20.0%, Germany 3.0%, Finland 3.0%, Pakistan 3.0% 2020-04-01 30 Indian lineage
B.1.185 USA 100.0% 2020-04-24 33 USA lineage (previously B.1.5.15)
B.1.186 Saudi_Arabia 54.0%, Italy 9.0%, India 8.0%, Australia 8.0%, UK 6.0% 2020-03-16 103 Saudi-arabian/ Indian lineage
B.1.187 Poland 100.0% 2020-03-28 29 Polish lineage
B.1.188 USA 100.0% 2020-07-17 34 USA lineage
B.1.189 USA 94.0%, Mexico 5.0%, Canada 1.0% 2020-03-26 158 USA/ Mexico lineage (some previously B.1.5.11)
B.1.190 Netherlands 95.0%, UK 4.0%, Belgium 1.0% 2020-03-13 85 Previously B.1.5.2, Netherlands lineage
B.1.191 UK 100.0% 2020-06-01 3 Previously B.1.5.21, Scottish lineage
B.1.192 Equatorial_Guinea 100.0% 2020-04-21 59 Equatorial Guinea lineage
B.1.193 USA 100.0% 2020-06-23 14 USA lineage
B.1.194 USA 90.0%, Kenya 10.0% 2020-05-23 21 USA lineage
B.1.195 Uruguay 100.0% 2020-04-07 17 Uruguay lineage
B.1.196 USA 100.0% 2020-06-18 66 USA lineage
B.1.197 Australia 52.0%, New_Zealand 41.0%, UK 3.0%, Ecuador 3.0%, Ireland 2.0% 2020-03-19 66 Australian/ New Zealand lineage
B.1.198 UK 100.0% 2020-04-03 12 UK lineage
B.1.199 USA 99.0%, Bahrain 1.0% 2020-03-18 114 USA lineage
B.1.200 0 Previously part of B.1.98, reassigned UK lineage
B.1.201 UK 91.0%, Portugal 4.0%, Egypt 3.0%, Australia 1.0%, Mexico 1.0% 2020-03-15 74 Previously part of B.1.75, reassigned UK lineage
B.1.202 USA 92.0%, UK 2.0%, Kenya 1.0%, France 1.0%, Germany 1.0% 2020-03-15 316 USA lineage
B.1.203 Panama 76.0%, Costa_Rica 22.0%, Czech_Republic 2.0% 2020-03-06 45 Panama/ Costa Rica lineage
B.1.204 USA 94.0%, UK 4.0%, Bosnia_and_Herzegovina 2.0% 2020-03-18 50 USA lineage
B.1.205 Peru 96.0%, Israel 4.0% 2020-03-05 27 Peru lineage
B.1.206 USA 100.0%, Germany 0.0% 2020-05-20 886 USA lineage (TX)
B.1.207 USA 99.0%, Australia 0.0%, Spain 0.0% 2020-03-28 330 USA lineage (TX)
B.1.208 France 95.0%, Ireland 5.0% 2020-03-15 20 Small French lineage
B.1.209 UK 94.0%, Italy 6.0% 2020-03-13 18 Small Scottish lineage
B.1.210 India 96.0%, Australia 2.0%, Luxembourg 1.0%, Singapore 0.0%, Iran 0.0% 2020-03-21 249 Indian lineage, Reassigned from B.1.80, split this assignment
B.1.211 Luxembourg 53.0%, Belgium 31.0%, France 14.0%, Canada 3.0% 2020-03-04 36 Luxembourg lineage
B.1.212 Brazil 50.0%, Mexico 11.0%, France 11.0%, USA 6.0%, Egypt 6.0% 2020-03-20 18 Brazil lineage
B.1.213 Poland 69.0%, UK 9.0%, Denmark 7.0%, Luxembourg 7.0%, Germany 4.0% 2020-05-10 45 Polish lineage
B.1.214 DRC 87.0%, Uganda 5.0%, Belgium 3.0%, New_Zealand 3.0%, France 3.0% 2020-04-18 38 DRC lineage
B.1.215 UK 99.0%, USA 1.0% 2020-03-14 93 Scottish lineage, previously some of B.1.77
B.1.216 USA 100.0% 2020-05-05 135 USA lineage
B.1.217 India 85.0%, UK 11.0%, Norway 2.0%, Hong_Kong 1.0% 2020-04-07 81 Indian lineage Reassigned from B.1.80, split this assignment
B.1.218 Denmark 66.0%, UK 22.0%, Switzerland 7.0%, Germany 3.0%, Hungary 1.0% 2020-07-20 138 Denmark lineage
B.1.219 Suriname 86.0%, France 6.0%, Belgium 3.0%, Netherlands 2.0%, Denmark 2.0% 2020-03-22 64 Suriname lineage
B.1.220 Netherlands 52.0%, UK 29.0%, France 5.0%, Canada 3.0%, Reunion 3.0% 2020-03-14 73 Netherlands lineage
B.1.221 Denmark 30.0%, Netherlands 19.0%, UK 17.0%, Belgium 12.0%, Luxembourg 11.0% 2020-03-21 4188 Netherlands/ Belgium lineage
B.1.222 UK 88.0%, USA 4.0%, Germany 2.0%, Spain 1.0%, Switzerland 0.0% 2020-03-14 228 Scottish lineage, split from B.1.141
B.1.223 UK 87.0%, Spain 5.0%, Ecuador 3.0%, Poland 2.0%, Netherlands 1.0% 2020-03-17 219 Previously B.1.5.6, Spain/ UK lineage
B.1.224 Austria 100.0% 2020-04-21 36 Austrian lineage
B.1.225 UK 93.0%, Italy 2.0%, Denmark 2.0%, USA 2.0%, South_Africa 2.0% 2020-04-13 61 UK lineage (reassigned from B.1.5.5)
B.1.226 0 Equatorial Guinea lineage
B.1.227 Sweden 100.0% 2020-03-16 17 Swedish lineage
B.1.228 USA 92.0%, Mexico 7.0%, Iceland 1.0% 2020-04-10 180 USA lineage, reassigned from B.1.5.27 split
B.1.229 UK 100.0% 2020-04-03 37 UK lineage, reassigned from B.1.5.25
B.1.230 USA 97.0%, Mexico 2.0%, South_Korea 0.0%, Latvia 0.0% 2020-04-21 234 USA lineage, reassigned from B.1.5.27 split
B.1.231 UK 97.0%, Portugal 3.0% 2020-03-19 30 UK lineage, reassigned from B.1.5.28
B.1.232 USA 73.0%, UK 25.0%, Mexico 1.0%, Taiwan 0.0% 2020-04-06 307 UK and USA lineage, reassigned from B.1.5.26
B.1.233 USA 100.0% 2020-06-17 45 USA lineage (OR)
B.1.234 USA 99.0%, UK 1.0%, Denmark 0.0%, Bermuda 0.0% 2020-06-15 737 USA lineage
B.1.235 UK 100.0%, Denmark 0.0%, USA 0.0% 2020-04-04 875 UK lineage
B.1.236 Switzerland 37.0%, UK 35.0%, Denmark 13.0%, Belgium 2.0%, Norway 2.0% 2020-06-24 201 Switzerland/ Denmark lineage
B.1.237 South_Africa 97.0%, USA 2.0%, Australia 1.0% 2020-04-24 104 South African lineage
B.1.238 UK 91.0%, USA 9.0% 2020-05-14 76 UK lineage
B.1.239 USA 98.0%, New_Zealand 2.0%, Mexico 1.0% 2020-05-01 120 USA lineage
B.1.240 USA 93.0%, UK 5.0%, Australia 0.0%, Aruba 0.0%, Curacao 0.0% 2020-04-02 1089 USA lineage
B.1.241 USA 92.0%, Mexico 6.0%, Australia 1.0%, Malaysia 0.0% 2020-04-06 341 USA/ Mexico lineage
B.1.242 Norway 98.0%, South_Africa 2.0% 2020-06-19 46 Norway lineage
B.1.243 USA 99.0%, Mexico 0.0%, Bermuda 0.0%, Australia 0.0%, South_Korea 0.0% 2020-03-23 2027 USA lineage
B.1.244 0 Saudi Arabian lineage that previously was part of B.1.160
B.1.245 USA 92.0%, Mexico 8.0% 2020-03-24 24 USA lineage
B.1.246 Saudi_Arabia 49.0%, India 14.0%, UK 9.0%, Indonesia 6.0%, Nigeria 5.0% 2020-02-04 391 Saudi Arabian lineage, previously some assigned B.1.160
B.1.247 Denmark 30.0%, India 18.0%, UK 17.0%, Saudi_Arabia 10.0%, USA 8.0% 2020-02-03 854 Indian/ Saudi Arabian diversity, now European and Australian diversity too, previously some assigned B.1.160 and B.1.36
B.1.248 UK 100.0% 2020-03-28 33 UK lineage
B.1.249 UK 100.0% 2020-03-09 16 UK lineage
B.1.250 UK 97.0%, Singapore 3.0% 2020-03-12 68 UK lineage
B.1.251 UK 100.0% 2020-06-01 46 UK lineage
B.1.252 UK 96.0%, Australia 4.0% 2020-03-27 131 UK lineage, previously part of B.1.11
B.1.253 UK 90.0%, USA 6.0%, Latvia 4.0% 2020-06-04 48 UK lineage
B.1.254 UK 100.0% 2020-04-06 53 Scottish lineage, previously part of B.1.88
B.1.255 USA 70.0%, Canada 5.0%, UK 4.0%, Argentina 3.0%, Australia 2.0% 2020-02-29 1140 North American lineage, with other global diversity
B.1.256 UK 94.0%, Spain 3.0%, USA 2.0%, Belgium 2.0% 2020-03-22 64 Scottish lineage, previously B.1.5.18
B.1.257 0 UK lineage
B.1.258 UK 45.0%, Denmark 26.0%, Iceland 4.0%, Switzerland 4.0%, Netherlands 3.0% 2020-06-23 4243 N439K mutation lineage
B.1.258.1 France 100.0% 2020-08-09 16 French lineage
B.1.258.2 Ireland 86.0%, UK 14.0%, Norway 0.0% 2020-07-03 221 Irish lineage (has sub-lineage G.1)
B.1.258.3 UK 95.0%, Romania 1.0%, Ireland 1.0%, Denmark 1.0%, Portugal 0.0% 2020-07-06 437 UK lineage
B.1.258.4 UK 100.0%, Germany 0.0% 2020-09-02 252 UK lineage, previously B.1.5.23
B.1.258.5 UK 98.0%, USA 1.0%, Australia 1.0% 2020-04-07 98 UK lineage
B.1.258.6 UK 98.0%, Australia 2.0% 2020-09-10 49 UK lineage
B.1.258.7 UK 100.0%, Italy 0.0% 2020-08-29 475 UK lineage
B.1.258.8 Denmark 100.0%, Faroe_Islands 0.0% 2020-09-07 211 Danish lineage
B.1.258.9 Denmark 99.0%, Switzerland 1.0%, Australia 1.0% 2020-08-31 158 Danish lineage
B.1.258.10 UK 99.0%, Denmark 1.0% 2020-09-17 87 Scottish lineage
B.1.258.11 Denmark 99.0%, UK 0.0%, Netherlands 0.0%, Switzerland 0.0%, Iceland 0.0% 2020-09-14 1273 Danish lineage
B.1.258.12 Denmark 64.0%, UK 35.0%, Czech_Republic 1.0%, Singapore 0.0%, Iceland 0.0% 2020-09-10 328 UK lineage
B.1.258.13 0 Danish lineage
B.1.259 Saudi_Arabia 67.0%, India 7.0%, Netherlands 7.0%, Switzerland 4.0%, UK 4.0% 2020-04-01 27 Saudi Arabia/ India lineage
B.1.260 Saudi_Arabia 88.0%, India 8.0%, Switzerland 1.0%, USA 1.0%, Canada 1.0% 2020-03-23 112 Saudi Arabian lineage
B.1.261 Saudi_Arabia 91.0%, India 3.0%, South_Korea 3.0%, Nigeria 3.0% 2020-03-24 33 Saudi Arabian lineage
B.1.262 Denmark 49.0%, USA 33.0%, Chile 7.0%, Sweden 4.0%, Faroe_Islands 4.0% 2020-03-03 57 Danish lineage
B.1.263 Denmark 75.0%, USA 17.0%, Ireland 8.0% 2020-03-09 24 Danish lineage
B.1.264 USA 93.0%, Canada 4.0%, UK 2.0% 2020-03-20 45 USA lineage (UT)
B.1.265 USA 94.0%, Sweden 1.0%, Australia 1.0%, Nigeria 1.0%, Spain 1.0% 2020-03-02 503 USA lineage
B.1.266 Austria 89.0%, USA 11.0% 2020-03-23 45 Austrian lineage
B.1.267 USA 97.0%, Mexico 3.0% 2020-03-24 33 USA lineage (CA)
B.1.268 USA 100.0% 2020-03-18 95 USA lineage
B.1.269 Slovenia 100.0% 2020-03-24 8 Slovenian lineage
B.1.270 Canada 75.0%, USA 15.0%, Luxembourg 10.0% 2020-03-18 20 Canadian lineage
B.1.271 USA 100.0% 2020-07-10 19 USA lineage
B.1.272 France 22.0%, Portugal 22.0%, UK 20.0%, USA 10.0%, Senegal 7.0% 2020-03-13 41 France/ Australian lineage
B.1.273 France 89.0%, Republic_of_Congo 6.0%, Côte_d'Ivoire 6.0% 2020-03-20 18 France/ Congo/ Cote d’Ivoire lineage
B.1.274 USA 100.0% 2020-05-05 76 USA lineage
B.1.275 France 52.0%, UK 10.0%, USA 9.0%, Australia 6.0%, Portugal 4.0% 2020-03-12 209 France lineage
B.1.276 USA 86.0%, UK 7.0%, Singapore 2.0%, Australia 2.0%, Czech_Republic 1.0% 2020-03-05 344 USA lineage
B.1.277 Portugal 57.0%, UK 30.0%, Iceland 13.0% 2020-03-18 23 UK/ Portugal lineage
B.1.278 0 UK/ Australia lineage, previously part of B.1.13
B.1.279 Canada 100.0%, USA 0.0% 2020-03-15 1341 Canadian lineage
B.1.280 USA 97.0%, Iceland 3.0%, Singapore 0.0%, Mexico 0.0% 2020-06-08 318 USA lineage
B.1.281 Bahrain 90.0%, Denmark 3.0%, Germany 3.0%, USA 3.0% 2020-04-02 29 Bahrain lineage
B.1.282 UK 100.0% 2020-06-01 68 UK lineage
B.1.283 USA 100.0% 2020-03-17 75 USA lineage
B.1.284 USA 100.0% 2020-04-24 34 USA lineage
B.1.285 USA 97.0%, Australia 3.0% 2020-03-15 39 USA lineage
B.1.286 USA 100.0% 2020-03-21 31 USA lineage
B.1.287 USA 97.0%, Luxembourg 3.0% 2020-04-17 36 USA lineage
B.1.288 USA 57.0%, Denmark 34.0%, Iceland 5.0%, Kenya 2.0%, Australia 2.0% 2020-03-10 56 Denmark lineage
B.1.289 USA 98.0%, Canada 1.0%, Russia 1.0% 2020-03-14 100 USA lineage
B.1.290 USA 100.0% 2020-05-23 9 USA lineage
B.1.291 Costa_Rica 100.0% 2020-06-19 37 Costa Rica lineage
B.1.292 USA 38.0%, Gambia 33.0%, Belgium 8.0%, France 8.0%, Ireland 3.0% 2020-03-16 39 Belgium/ Gambia/ Senegal/ French lineage
B.1.293 USA 85.0%, UK 11.0%, New_Zealand 4.0% 2020-03-16 46 USA lineage
B.1.294 USA 100.0% 2020-06-16 29 USA lineage
B.1.295 Australia 88.0%, USA 12.0% 2020-03-22 8 Australian lineage
B.1.296 USA 82.0%, Australia 18.0% 2020-03-16 44 USA/ Australian lineage
B.1.297 USA 100.0% 2020-03-14 22 USA lineage
B.1.297.1 Canada 100.0% 2020-04-03 13 Canadian lineage
B.1.298 USA 100.0% 2020-03-20 75 USA lineage
B.1.299 USA 98.0%, Mexico 2.0% 2020-03-19 44 USA lineage
B.1.300 USA 97.0%, Australia 3.0% 2020-03-25 39 USA lineage
B.1.301 USA 98.0%, Luxembourg 1.0%, Canada 1.0% 2020-03-27 177 USA lineage
B.1.302 UK 54.0%, USA 43.0%, Denmark 4.0% 2020-03-12 112 USA/ Denmark lineage
B.1.303 USA 100.0% 2020-04-04 17 USA lineage
B.1.304 USA 100.0% 2020-06-05 42 USA lineage
B.1.305 USA 97.0%, Denmark 0.0%, Latvia 0.0%, Luxembourg 0.0%, Canada 0.0% 2020-03-17 211 USA lineage
B.1.306 USA 100.0% 2020-06-03 44 USA lineage
B.1.307 USA 100.0% 2020-03-11 10 USA lineage
B.1.308 USA 93.0%, Canada 4.0%, Ecuador 4.0% 2020-03-22 27 USA lineage
B.1.309 USA 100.0% 2020-04-07 25 USA lineage
B.1.310 Netherlands 100.0% 2020-04-04 13 Netherlands lineage
B.1.311 USA 99.0%, Jordan 0.0%, Iceland 0.0% 2020-08-28 210 USA lineage
B.1.312 UK 95.0%, USA 3.0%, Australia 3.0% 2020-03-29 38 USA lineage
B.1.313 USA 90.0%, Canada 7.0%, Australia 3.0% 2020-03-14 130 USA lineage
B.1.314 USA 78.0%, Canada 17.0%, Australia 3.0%, Iceland 2.0% 2020-03-13 64 North American lineage
B.1.315 USA 94.0%, Canada 2.0%, Iceland 2.0%, Australia 2.0%, France 2.0% 2020-03-16 64 USA lineage
B.1.316 Canada 100.0% 2020-04-29 7 Canadian lineage
B.1.317 USA 100.0% 2020-07-08 29 USA lineage
B.1.318 USA 100.0% 2020-06-22 11 USA lineage
B.1.319 Australia 82.0%, USA 13.0%, New_Zealand 5.0% 2020-03-16 62 USA/ Australia lineage
B.1.320 USA 88.0%, Canada 10.0%, Mexico 1.0%, Germany 1.0%, UK 1.0% 2020-03-13 172 USA lineage
B.1.321 Belgium 69.0%, UK 19.0%, Chile 6.0%, Spain 6.0% 2020-03-09 16 Belgian lineage
B.1.322 USA 97.0%, Germany 3.0% 2020-03-11 36 USA lineage
B.1.323 USA 94.0%, Canada 6.0% 2020-03-29 16 USA lineage
B.1.324 USA 98.0%, Costa_Rica 1.0%, Mexico 1.0%, UK 1.0% 2020-03-15 172 USA lineage
B.1.325 USA 98.0%, Germany 1.0%, South_Africa 1.0%, Denmark 0.0%, Sweden 0.0% 2020-03-09 324 USA lineage (TX)
B.1.326 USA 100.0% 2020-04-25 52 USA lineage (TX)
B.1.327 Denmark 71.0%, USA 29.0% 2020-03-23 17 Danish lineage
B.1.328 USA 97.0%, Mexico 1.0%, Germany 1.0%, Denmark 1.0% 2020-03-11 103 USA lineage
B.1.329 Germany 100.0% 2020-05-20 60 German lineage
B.1.330 USA 100.0% 2020-03-24 36 USA lineage
B.1.331 USA 100.0% 2020-03-13 87 USA lineage
B.1.332 USA 93.0%, Denmark 2.0%, Israel 2.0%, China 1.0%, Australia 1.0% 2020-03-14 87 USA lineage
B.1.333 USA 99.0%, Canada 1.0% 2020-03-24 105 USA lineage, previously part of B.1.169
B.1.334 USA 93.0%, UK 3.0%, Canada 2.0%, New_Zealand 2.0% 2020-03-18 58 USA lineage
B.1.335 USA 100.0% 2020-05-12 77 USA lineage
B.1.336 USA 100.0% 2020-03-15 130 USA lineage, previously part of B.1.2
B.1.337 USA 100.0% 2020-03-15 37 USA lineage
B.1.338 Australia 100.0% 2020-04-20 102 Australian lineage
B.1.339 Ireland 100.0% 2020-09-06 11 Irish lineage
B.1.340 USA 100.0% 2020-05-19 54 USA lineage
B.1.341 USA 100.0% 2020-04-25 26 USA lineage
B.1.342 Sweden 90.0%, USA 10.0% 2020-05-23 10 Swedish lineage
B.1.343 Denmark 76.0%, USA 11.0%, Canada 4.0%, Poland 4.0%, Latvia 2.0% 2020-03-09 45 Danish lineage
B.1.344 USA 100.0% 2020-04-02 26 USA lineage (CO)
B.1.345 Canada 57.0%, USA 29.0%, Turkey 14.0% 2020-03-21 7 Canadian lineage
B.1.346 USA 99.0%, Canada 1.0%, Ireland 1.0% 2020-03-17 191 USA lineage
B.1.347 Canada 100.0% 2020-03-22 62 Canadian lineage, previously part of B.1.114 lineage
B.1.348 Australia 74.0%, USA 25.0%, Canada 1.0% 2020-04-01 213 USA lineage
B.1.349 USA 98.0%, Canada 2.0%, UK 1.0% 2020-07-01 169 USA lineage
B.1.350 Canada 86.0%, USA 6.0%, Portugal 4.0%, Denmark 2.0%, UK 1.0% 2020-03-13 138 Canadian lineage
B.1.351 South_Africa 83.0%, UK 12.0%, Botswana 1.0%, Australia 1.0%, Germany 1.0% 2020-10-08 538 South African lineage defined by new variant 501Y.V2 - A more detailed description of the lineage is here and a preprint describing the variant is here: https://www.medrxiv.org/content/10.1101/2020.12.21.20248640v1.
B.1.352 USA 95.0%, South_Korea 5.0% 2020-03-26 22 USA lineage (CA)
B.1.353 Germany 33.0%, Denmark 22.0%, Austria 9.0%, Sweden 7.0%, UK 6.0% 2020-03-08 125 European lineage
B.1.354 USA 48.0%, Denmark 48.0%, France 4.0% 2020-03-12 23 Danish lineage
B.1.355 USA 100.0% 2020-05-09 31 USA lineage
B.1.356 Netherlands 25.0%, Spain 24.0%, UK 21.0%, France 14.0%, USA 6.0% 2020-02-28 400 Spanish/ Netherlands lineage
B.1.357 USA 100.0% 2020-06-05 74 USA lineage
B.1.358 Denmark 64.0%, USA 29.0%, UK 2.0%, New_Zealand 2.0%, Algeria 1.0% 2020-03-10 125 Danish lineage
B.1.359 USA 100.0% 2020-03-09 76 USA lineage
B.1.360 USA 99.0%, Canada 1.0% 2020-03-17 77 USA lineage
B.1.361 USA 98.0%, Denmark 1.0%, UK 0.0%, South_Korea 0.0%, Bermuda 0.0% 2020-03-11 1433 USA lineage
B.1.362 UK 65.0%, Israel 33.0%, Denmark 1.0%, France 1.0%, Hong_Kong 0.0% 2020-04-03 304 UK/ Israel lineage
B.1.363 USA 99.0%, Denmark 1.0%, Mexico 0.0% 2020-05-13 599 USA lineage
B.1.364 USA 100.0% 2020-04-02 37 USA lineage
B.1.365 USA 99.0%, Taiwan 1.0% 2020-03-20 77 USA lineage
B.1.366 USA 100.0% 2020-04-20 167 USA lineage
B.1.367 UK 43.0%, France 17.0%, Switzerland 11.0%, Denmark 10.0%, Norway 7.0% 2020-03-24 642 French lineage
B.1.368 USA 97.0%, Australia 1.0%, Belgium 1.0%, France 1.0%, Canada 0.0% 2020-03-12 322 USA lineage
B.1.369 USA 94.0%, Canada 3.0%, New_Zealand 2.0%, India 0.0%, UK 0.0% 2020-03-12 2425 USA/ New Zealand lineage
B.1.370 USA 97.0%, Australia 1.0%, Canada 0.0%, New_Zealand 0.0%, Singapore 0.0% 2020-03-08 3145 USA lineage
B.1.371 USA 100.0%, Ecuador 0.0% 2020-03-12 265 Danish/ USA lineage, previously part of B.1.21
B.1.372 Denmark 95.0%, UK 3.0%, Sweden 1.0% 2020-03-30 87 Danish lineage
B.1.373 Sweden 89.0%, Germany 11.0% 2020-03-21 9 Swedish lineage
B.1.374 0 European lineage
B.1.374.1 0 Bangladesh lineage
B.1.375 USA 99.0%, UK 1.0% 2020-09-23 191 US lineage circulating in Connecticut with the 69-70del, which leads to SGTF. However, they express 484E and 501N in their spike proteins.
B.2.1 0 Lineage reassigned. Reassigned to B.40
B.2.6 0 Lineage reassigned. Reassigned to B.35
B.2.10 0 Lineage reassigned. Reassigned to B.41
B.2.11 0 Lineage reassigned. Reassigned to B.36
B.2.12 0 Lineage reassigned. Reassigned to B.30
B.3 UK 59.0%, Germany 12.0%, Belgium 4.0%, Australia 4.0%, Denmark 4.0% 2020-02-23 960 A European lineage
B.3.1 UK 99.0%, USA 0.0%, Canada 0.0%, Viet_Nam 0.0% 2020-03-08 577 Welsh lineage
B.4 Australia 21.0%, UK 14.0%, India 10.0%, United_Arab_Emirates 8.0%, USA 7.0% 2020-01-18 414 Iranian lineage and global exports
B.4.1 Kazakhstan 100.0% 2020-03-22 27 Lineage from Kazakhstan within the B.4 diversity
B.4.2 Bahrain 93.0%, United_Arab_Emirates 7.0% 2020-02-25 15 Bahrein lineage
B.4.4 USA 72.0%, Australia 26.0%, Canada 2.0% 2020-03-10 47 USA lineage
B.4.5 Australia 79.0%, Canada 4.0%, Hong_Kong 3.0%, USA 3.0%, China 3.0% 2020-01-24 111 Australian lineage
B.5 Japan 88.0%, USA 6.0%, France 6.0% 2020-02-15 16 Japanese lineage
B.6 India 54.0%, Australia 9.0%, USA 6.0%, Malaysia 6.0%, Singapore 5.0% 2020-02-14 888 Indian lineage
B.6.1 Malaysia 91.0%, Brunei 5.0%, India 5.0% 2020-03-21 22 Malaysian lineage
B.6.2 Malaysia 100.0% 2020-05-23 14 Malaysian lineage
B.6.3 Singapore 96.0%, India 4.0% 2020-03-11 24 Singapore lineage
B.6.4 Singapore 100.0% 2020-04-18 22 Singapore lineage
B.6.5 Australia 100.0% 2020-03-20 9 Australian lineage
B.6.6 Singapore 92.0%, India 7.0%, Malaysia 1.0%, Australia 1.0%, Pakistan 0.0% 2020-03-13 940 Singapore lineage
B.10 UK 98.0%, Spain 1.0%, Switzerland 1.0% 2020-03-12 126 Northern Irish lineage/Users/s1680070/repositories/cov-support/cov_support/scripts/update_website.py
B.11 Netherlands 54.0%, UK 24.0%, Belgium 5.0%, Germany 3.0%, USA 2.0% 2020-02-03 368 European lineage with sequences from the Netherlands, UK, Austria, Slovakia
B.12 Japan 97.0%, Malaysia 3.0% 2020-01-20 63 Japanese lineage
B.13 USA 100.0% 2020-04-03 21 USA lineage
B.14 0 USA lineage
B.15 UK 100.0% 2020-03-11 55 USA lineage
B.18 UK 85.0%, Iceland 12.0%, Germany 4.0% 2020-03-11 26 European lineage (Iceland and England)
B.19 USA 100.0% 2020-03-29 26 USA lineage
B.20 USA 96.0%, Egypt 4.0% 2020-03-31 25 USA lineage
B.23 UK 81.0%, USA 6.0%, Portugal 6.0%, Iceland 6.0%, Brazil 1.0% 2020-02-28 143 Lineage with representation from mainly UK sequences, but also sequences from Portugal, Iceland and Brazil
B.26 UK 89.0%, USA 4.0%, Gambia 2.0%, Australia 2.0%, Argentina 2.0% 2020-03-17 47 UK lineage
B.27 UK 89.0%, Curacao 8.0%, Switzerland 2.0%, USA 2.0% 2020-03-03 62 UK lineage
B.28 UK 75.0%, USA 6.0%, Australia 6.0%, Germany 3.0%, Jordan 2.0% 2020-03-06 288 UK lineage
B.29 UK 68.0%, Australia 18.0%, Spain 3.0%, Ireland 2.0%, New_Zealand 2.0% 2020-02-12 246 UK/ Australian lineage
B.30 USA 100.0% 2020-03-09 50 Reassigned from B.2.12, USA lineage
B.31 UK 61.0%, New_Zealand 19.0%, Australia 12.0%, USA 2.0%, Spain 1.0% 2020-03-03 243 Reassigned from B.2.5, UK/ Australia/ New Zealand lineage
B.32 UK 100.0% 2020-03-13 25 Scottish lineage
B.33 UK 100.0% 2020-03-03 47 UK lineage
B.34 UK 100.0% 2020-03-13 70 Scottish lineage
B.35 UK 73.0%, Australia 8.0%, USA 4.0%, Singapore 3.0%, Iceland 3.0% 2020-03-05 98 Previously B.2.6, USA lineage
B.36 Israel 90.0%, Taiwan 10.0% 2020-03-17 10 Previously B.2.11, Israel lineage
B.37 USA 93.0%, Australia 7.0% 2020-03-12 28 USA lineage
B.38 Belgium 91.0%, Netherlands 3.0%, Portugal 3.0%, DRC 3.0% 2020-03-07 32 Belgium lineage
B.39 UK 80.0%, Australia 4.0%, USA 4.0%, Canada 2.0%, Brazil 2.0% 2020-02-25 460 Previously B.2.2, USA/ UK/ Australian lineage
B.40 UK 82.0%, USA 4.0%, Australia 3.0%, Portugal 2.0%, Ireland 1.0% 2020-02-07 2621 Previously B.2.1. Large lineage majoritively from UK and Australia with representation from Europe, Jordan, USA, India, Ghana
B.41 South_Korea 96.0%, Australia 2.0%, USA 2.0%, Ireland 1.0% 2020-02-17 121 Previously B.2.10, South Korean lineage
B.42 Hong_Kong 100.0% 2020-01-29 11 Hong Kong lineage
B.43 Hong_Kong 97.0%, Canada 3.0% 2020-01-30 37 Hong Kong lineage
B.44 Portugal 100.0% 2020-03-17 10 Portugal lineage
B.45 UK 100.0%, Belgium 0.0% 2020-03-13 262 Scottish lineage
B.46 USA 100.0% 2020-03-15 37 USA lineage
B.47 UK 100.0% 2020-03-06 22 English lineage
B.48 UK 98.0%, New_Zealand 1.0%, Iceland 1.0%, Hong_Kong 1.0% 2020-03-02 165 UK lineage
B.49 Denmark 100.0% 2020-03-09 20 Danish lineage
B.50 Indonesia 100.0% 2020-03-17 6 Indonesian lineage
B.51 USA 96.0%, UK 4.0% 2020-03-14 23 USA lineage
B.52 UK 89.0%, Australia 9.0%, New_Zealand 1.0%, South_Africa 1.0% 2020-03-12 80 UK lineage
B.53 Lithuania 100.0% 2020-04-02 60 Lithuanian lineage
B.54 UK 77.0%, USA 11.0%, Spain 5.0%, Indonesia 2.0%, France 1.0% 2020-03-02 96 UK lineage
C.1 South_Africa 97.0%, UK 2.0%, USA 1.0% 2020-06-03 280 Alias of B.1.1.1.1, South African lineage
C.2 South_Africa 65.0%, Australia 13.0%, UK 13.0%, Denmark 4.0%, Netherlands 4.0% 2020-06-09 23 Alias of B.1.1.1.2, South African lineage
C.3 UK 100.0% 2020-05-20 129 Alias of B.1.1.1.3, English lineage
C.4 Peru 96.0%, Serbia 4.0% 2020-06-15 24 Alias of B.1.1.1.4, Peru lineage
C.5 Switzerland 89.0%, Luxembourg 11.0% 2020-09-02 9 Alias of B.1.1.1.5, Swiss lineage
C.6 South_Africa 80.0%, UK 20.0% 2020-07-01 5 Alias of B.1.1.1.6, South African lineage
C.7 Denmark 100.0% 2020-05-25 28 Alias of B.1.1.1.7, Denmark lineage
C.8 Canada 98.0%, UK 2.0% 2020-06-19 64 Alias of B.1.1.1.8, Canada lineage
C.9 South_Africa 82.0%, UK 12.0%, Egypt 3.0%, Belgium 3.0% 2020-05-16 34 Alias of B.1.1.1.9, South African lineage
C.10 Poland 100.0% 2020-04-22 4 Alias of B.1.1.1.10, Poland lineage
C.11 Chile 100.0% 2020-04-10 50 Alias of B.1.1.1.11,Chilean lineage
C.12 New_Zealand 100.0% 2020-08-12 123 Alias of B.1.1.1.12,New Zealand lineage
C.13 Peru 89.0%, UK 11.0% 2020-03-31 19 Alias of B.1.1.1.13, Peru lineage
C.14 Peru 83.0%, Australia 5.0%, UK 3.0%, DRC 3.0%, Colombia 2.0% 2020-04-01 60 Alias of B.1.1.1.14, Peru lineage
C.15 Denmark 100.0% 2020-10-05 127 Alias of B.1.1.1.15, Denmark lineage
D.2 Australia 100.0%, Switzerland 0.0%, USA 0.0% 2020-03-19 12181 Australian lineage, Alias of B.1.1.25.1
D.3 Australia 100.0% 2020-06-14 149 Australian lineage, alias of B.1.1.25.3
E.1 France 92.0%, Belgium 8.0% 2020-07-02 49 Alias of B.1.5.12.1. French lineage within the diversity of a Senegal/ Gambia lineage
F.1 New_Zealand 90.0%, Hong_Kong 10.0% 2020-08-30 10 Alias of B.1.36.17.1, New Zealand lineage
G.1 UK 96.0%, USA 4.0% 2020-09-18 23 Alias of B.1.258.2.1, N439K UK lineage
H.1 South_Africa 95.0%, UK 5.0% 2020-06-18 134 Alias of B.1.1.67.1, South African lineage, split from B.1.1.10
I.1 Latvia 97.0%, UK 3.0% 2020-08-18 37 Alias of B.1.1.217.1, Latvian lineage, split from B.1.1.25
J.1 Australia 100.0% 2020-10-18 15 Alias of B.1.1.250.1, Australian lineage
K.1 South_Korea 95.0%, Russia 5.0% 2020-07-23 21 Alias of B.1.1.277, South Korean lineage
L.1 Canada 100.0% 2020-03-26 167 Alias of B.1.1.10.1, Canadian lineage
L.2 Netherlands 97.0%, Belgium 3.0% 2020-03-23 61 Alias of B.1.1.10.2, Netherlands lineage
M.1 Denmark 95.0%, UK 4.0%, Moldova 1.0% 2020-06-18 95 Alias of B.1.1.294.1, Danish lineage
N.1 USA 88.0%, Brazil 10.0%, Chile 2.0% 2020-03-25 40 Alias of B.1.1.33.1, USA lineage
N.2 France 55.0%, Suriname 36.0%, Iceland 9.0% 2020-06-25 11 Alias of B.1.1.33.2, French lineage
N.3 Argentina 98.0%, Chile 2.0% 2020-04-17 54 Alias of B.1.1.33.3, Argentinian lineage
N.4 Chile 99.0%, New_Zealand 1.0% 2020-04-01 124 Alias of B.1.1.33.4, Chilean lineage
P.1 Brazil 83.0%, Japan 14.0%, South_Korea 3.0% 2020-12-04 29 Alias of B.1.1.28.1, Brazilian lineage with a number of spike mutaions with likely functional significance E484K, K417T, and N501Y. Described in https://virological.org/t/genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-manaus-preliminary-findings/586.
P.2 Brazil 75.0%, UK 7.0%, USA 5.0%, Canada 4.0%, Argentina 3.0% 2020-10-09 147 Alias of B.1.1.28.2, Brazilian lineage
*A.8 0 Indian lineage merged with A.9
*B.1.1.73 0 Reassigned lineage
*B.1.5.2 0 Reassigned B.1.190, Netherlands lineage
*B.1.5.5 0 Reassigned B.1.225
*B.1.5.6 0 UK lineage reassigned B.1.223
*B.1.5.11 0 Reassigned B.1.189, USA/ Mexico lineage
*B.1.5.13 0 Reassigned B.1.180, Romanian lineage
*B.1.5.15 0 Reassigned B.1.185, USA lineage
*B.1.5.17 0 Reassigned B.1.181, USA lineage
*B.1.5.18 0 Reassigned B.1.256
*B.1.5.25 0 Reassigned B.1.229
*B.1.5.26 0 Reassigned B.1.232
*B.1.5.28 0 Reassigned B.1.231
*B.1.6 0 Reassigned lineage
*B.1.14 0 Reassigned lineage
*B.1.36.17.1 0 Alias F.1 New Zealand lineage
*B.1.150 0 Reassigned lineage
*B.1.173 0 Reassigned lineage
*B.2.1 0 Reassigned to B.40
*B.2.6 0 Reassigned to B.35
*B.2.10 0 Reassigned to B.41
*B.2.11 0 Reassigned to B.36
*B.2.12 0 Reassigned to B.30