| B.1.1 |
UK (83%) USA (5%) Portugal (1%) |
February 10 |
28655 |
|
European lineage that's been assigned due to high support and 3 clear SNPs `28881GA``28882GA``28883GC` |
0.97 |
| B.1.1.1 |
UK (88%) Peru (2%) South_Africa (1%) |
March 03 |
2318 |
|
UK/ Europe |
0.56 |
| B.1.1.10 |
UK (80%) Canada (7%) USA (4%) |
March 05 |
621 |
|
Formerly UK/ Iceland a lot of diversity in this lineage now has a Turkish sequence. |
0.77 |
| B.1.1.12 |
UK (94%) Ecuador (3%) Switzerland (3%) |
March 21 |
35 |
|
Scottish lineage |
0.72 |
| B.1.1.13 |
UK (100%) |
March 28 |
16 |
|
UK lineage (CAMB) |
1.0 |
| B.1.1.14 |
UK (100%) |
April 16 |
59 |
|
Scottish lineage |
1.0 |
| B.1.1.15 |
UK (93%) Portugal (3%) Luxembourg (1%) |
March 09 |
407 |
|
Luxembourgh/ UK/ Portugal lineage |
0.82 |
| B.1.1.16 |
UK (98%) India (2%) |
April 03 |
52 |
|
Wales lineage (some reassigned to B.1.1 as split up in most recent phylogeny) |
0.97 |
| B.1.1.17 |
Iceland (89%) UK (11%) |
March 06 |
9 |
|
Iceland lineage |
0.88 |
| B.1.1.19 |
|
|
|
|
Lineage reassigned. Reassigned to B.1.1 as split up in most recent phylogeny. Australian lineage |
|
| B.1.1.2 |
UK (100%) |
March 20 |
570 |
|
Welsh lineage |
0.99 |
| B.1.1.20 |
UK (59%) Portugal (16%) USA (12%) |
March 21 |
32 |
|
Scottish lineage |
0.93 |
| B.1.1.21 |
|
|
|
|
Lineage reassigned. Australian lineage reassigned to B.1.1 in most recent phylogeny |
|
| B.1.1.22 |
|
|
|
|
South African lineage |
|
| B.1.1.23 |
|
|
|
|
Lineage reassigned. Bangladesh lineage merged into B.1.1.25 in most recent phylogeny |
|
| B.1.1.24 |
|
|
|
|
Portuguese lineage |
|
| B.1.1.25 |
Bangladesh (52%) UK (36%) Australia (8%) |
February 29 |
368 |
|
Bangladesh lineage |
0.31 |
| B.1.1.26 |
USA (60%) UK (39%) Peru (1%) |
March 16 |
77 |
|
US lineage (WA) |
0.89 |
| B.1.1.27 |
Oman (94%) United_Arab_Emirates (5%) UK (1%) |
March 21 |
82 |
|
Lineage in Oman |
1.0 |
| B.1.1.28 |
Brazil (81%) UK (12%) Australia (2%) |
March 15 |
206 |
|
Brazil lineage some sister sequences from parent node are also from Brazil however there's sequences from a variety of other locations on that node. |
0.99 |
| B.1.1.29 |
UK (100%) |
February 28 |
166 |
|
Wales lineage |
0.98 |
| B.1.1.3 |
UK (100%) |
March 18 |
116 |
|
English lineage |
0.99 |
| B.1.1.30 |
UK (98%) Lithuania (1%) USA (1%) |
March 12 |
737 |
|
UK lineage (Wales & England) |
0.98 |
| B.1.1.31 |
UK (71%) Netherlands (28%) Spain (1%) |
March 25 |
79 |
|
Netherlands lineage |
0.15 |
| B.1.1.32 |
India (94%) UK (4%) USA (1%) |
March 24 |
500 |
|
Indian lineage |
0.99 |
| B.1.1.33 |
Brazil (76%) USA (8%) UK (4%) |
March 12 |
289 |
|
Majoritively South American lineage lots of Brazil sequences represented |
0.98 |
| B.1.1.34 |
South_Africa (63%) UK (30%) USA (3%) |
March 19 |
30 |
|
South African lineage |
1.0 |
| B.1.1.35 |
UK (96%) Peru (1%) New_Zealand (1%) |
March 02 |
3851 |
|
Previously a large part of B.1.1.1 however in the most recent phylogeny this has become a sister lineage to B.1.1.1. UK sequences represented in this lineage. |
0.98 |
| B.1.1.36 |
USA (100%) |
April 06 |
23 |
|
USA (CA) lineage |
1.0 |
| B.1.1.37 |
UK (100%) Switzerland (0%) Netherlands (0%) |
March 19 |
2630 |
|
UK lineage (England) |
0.98 |
| B.1.1.38 |
UK (98%) USA (2%) |
April 29 |
111 |
|
Wales lineage |
0.99 |
| B.1.1.39 |
Switzerland (53%) UK (35%) Norway (8%) |
July 01 |
119 |
|
Swiss lineage |
1.0 |
| B.1.1.4 |
UK (100%) |
March 31 |
343 |
|
UK lineage |
0.99 |
| B.1.1.40 |
South_Africa (91%) Russia (9%) |
May 13 |
11 |
|
South African lineage |
0.89 |
| B.1.1.41 |
UK (100%) |
March 21 |
183 |
|
English lineage |
1.0 |
| B.1.1.42 |
UK (60%) Turkey (29%) Switzerland (3%) |
April 13 |
62 |
|
Turkish lineage |
0.0 |
| B.1.1.43 |
UK (98%) Spain (1%) USA (1%) |
March 20 |
142 |
|
Scottish lineage |
0.46 |
| B.1.1.44 |
UK (98%) USA (1%) Lithuania (0%) |
March 23 |
311 |
|
UK lineage |
0.6 |
| B.1.1.45 |
UK (100%) |
May 22 |
64 |
|
UK lineage |
1.0 |
| B.1.1.46 |
India (76%) UK (15%) Brazil (4%) |
April 20 |
46 |
|
Indian lineage |
1.0 |
| B.1.1.47 |
UK (49%) Switzerland (44%) Italy (2%) |
April 03 |
55 |
|
Swiss lineage |
0.83 |
| B.1.1.48 |
Japan (100%) |
March 29 |
7 |
|
Japanese lineage |
0.86 |
| B.1.1.49 |
UK (94%) USA (6%) |
March 23 |
70 |
|
Wales lineage |
0.04 |
| B.1.1.5 |
UK (54%) Belgium (27%) Iceland (6%) |
March 16 |
52 |
|
Iceland/ Belgium/ UK |
0.05 |
| B.1.1.50 |
UK (51%) Israel (25%) Netherlands (23%) |
March 29 |
57 |
|
UK/ Israel lineage |
0.65 |
| B.1.1.51 |
UK (100%) |
March 25 |
568 |
|
UK lineage |
0.99 |
| B.1.1.52 |
UK (69%) South_Africa (31%) |
April 05 |
65 |
|
South African lineage (same parent node as B.1.1.53 but parent node is a large polytomy) |
0.0 |
| B.1.1.53 |
South_Africa (65%) USA (27%) Switzerland (4%) |
April 02 |
26 |
|
South African lineage (same parent node as B.1.1.53 but parent node is a large polytomy) |
0.45 |
| B.1.1.54 |
South_Africa (91%) UK (8%) USA (1%) |
March 19 |
253 |
|
South African lineage |
0.71 |
| B.1.1.55 |
UK (88%) USA (6%) France (3%) |
March 20 |
186 |
|
England lineage |
0.75 |
| B.1.1.56 |
South_Africa (82%) UK (17%) Australia (1%) |
March 21 |
103 |
|
South African lineage |
0.57 |
| B.1.1.57 |
South_Africa (91%) Russia (9%) |
March 31 |
22 |
|
South African lineage |
1.0 |
| B.1.1.58 |
Switzerland (67%) UK (33%) |
June 23 |
15 |
|
Swiss lineage |
0.86 |
| B.1.1.59 |
UK (99%) Bangladesh (1%) USA (1%) |
March 08 |
162 |
|
Wales lineage |
0.98 |
| B.1.1.6 |
Austria (80%) Switzerland (10%) USA (10%) |
February 26 |
10 |
|
Austrian lineage |
0.0 |
| B.1.1.60 |
UK (98%) USA (1%) Russia (1%) |
March 19 |
369 |
|
Northern Ireland lineage |
0.98 |
| B.1.1.61 |
USA (92%) Canada (5%) Italy (3%) |
February 29 |
39 |
|
USA lineage (CA) |
0.53 |
| B.1.1.62 |
South_Africa (75%) UK (21%) Australia (4%) |
March 23 |
24 |
|
South African lienage |
0.7 |
| B.1.1.63 |
Hong_Kong (68%) South_Korea (12%) UK (8%) |
June 30 |
25 |
|
Hong Kong lineage |
0.7 |
| B.1.1.64 |
UK (94%) USA (2%) Australia (1%) |
March 11 |
299 |
|
UK lineage |
0.99 |
| B.1.1.65 |
USA (97%) UK (3%) |
April 15 |
38 |
|
USA lineage (WA) previously B.1.1.26 however split in most recent phylogeny |
0.84 |
| B.1.1.66 |
South_Africa (62%) UK (33%) USA (3%) |
April 05 |
39 |
|
South African lineage |
0.95 |
| B.1.1.67 |
UK (79%) South_Africa (19%) USA (1%) |
May 12 |
132 |
|
English/ South African lineage |
0.32 |
| B.1.1.68 |
Russia (83%) UK (12%) USA (4%) |
April 03 |
24 |
|
Russian lineage |
0.0 |
| B.1.1.69 |
|
|
|
|
Switzerland/ UK/ Italy lineage |
|
| B.1.1.7 |
UK (89%) Japan (3%) Australia (2%) |
March 07 |
243 |
|
UK lineage |
0.98 |
| B.1.1.70 |
UK (68%) Switzerland (17%) Serbia (7%) |
March 24 |
301 |
|
Northern Ireland lineage |
0.72 |
| B.1.1.71 |
Netherlands (37%) UK (29%) Australia (7%) |
March 06 |
68 |
|
Australian/ Belgium/ Netherlands lineage |
1.0 |
| B.1.1.72 |
UK (41%) India (37%) Singapore (14%) |
March 28 |
106 |
|
UK/ India lineage |
0.71 |
| B.1.1.73 |
USA (95%) UK (5%) |
April 17 |
106 |
|
USA lineage |
1.0 |
| B.1.1.74 |
UK (89%) Belgium (11%) Netherlands (0%) |
March 29 |
241 |
|
Northern Ireland/ Belgium lineage |
1.0 |
| B.1.1.75 |
UK (39%) Belgium (25%) Sweden (11%) |
March 20 |
44 |
|
Belgium/ South Africa/ DRC lineage |
0.92 |
| B.1.1.76 |
USA (87%) UK (10%) Spain (3%) |
April 03 |
39 |
|
USA lineage (WA) |
0.81 |
| B.1.1.77 |
USA (96%) UK (3%) Peru (0%) |
March 18 |
442 |
|
USA lineage (WA) |
0.67 |
| B.1.1.8 |
India (98%) UK (2%) |
May 11 |
184 |
|
Indian lineage |
0.99 |
| B.1.1.9 |
|
|
|
|
Lineage reassigned. Reassigned B.1.1 split into three this week unstable lineage |
|
| B.1.1.p11 |
|
|
|
|
Lineage reassigned. Reassigned B.1.1 previously Portugal/ Wales/ England/ Ecuador |
|
| C.1 |
South_Africa (99%) UK (1%) |
June 03 |
126 |
|
South African lineage (Alias of B.1.1.1.1) |
0.99 |
| C.2 |
South_Africa (92%) UK (8%) |
June 09 |
13 |
|
South African lineage (Alias of B.1.1.1.2) |
1.0 |
| C.3 |
UK (100%) |
April 12 |
143 |
|
English lineage (Alias of B.1.1.1.3) |
1.0 |
| D.1 |
UK (100%) |
July 21 |
2197 |
|
UK lineage (Alias of B.1.1.25.2) |
0.99 |
| D.2 |
Australia (100%) |
March 19 |
1846 |
|
Australian lineage (Alias of B.1.1.25.1) |
0.98 |
